RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 ARHGEF10O15013 1369 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 JCADQ9P266 1359 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 PEAK1Q9H792 1746 aa8.2□□□□□ -1.1
CMTM1-220ENST00000534143 PHRF1Q9P1Y6 1649 aaKnown RBP8.19□□□□□ -1.1
CMTM1-220ENST00000534143 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 GCP02774 474 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 RRS1Q15050 365 aaKnown RBP8.19□□□□□ -1.1
CMTM1-220ENST00000534143 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 KCNH5Q8NCM2 988 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 MAP3K19Q56UN5 1328 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 KIF24Q5T7B8 1368 aa8.19□□□□□ -1.1
CMTM1-220ENST00000534143 CDK12Q9NYV4 1490 aaPredicted RBP8.19□□□□□ -1.1
CMTM1-220ENST00000534143 LTN1O94822 1766 aa8.18□□□□□ -1.1
CMTM1-220ENST00000534143 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
CMTM1-220ENST00000534143 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
CMTM1-220ENST00000534143 ARHGEF25Q86VW2 580 aa8.18□□□□□ -1.1
CMTM1-220ENST00000534143 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
CMTM1-220ENST00000534143 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
CMTM1-220ENST00000534143 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
CMTM1-220ENST00000534143 IL13P35225 146 aa8.17□□□□□ -1.1
CMTM1-220ENST00000534143 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
CMTM1-220ENST00000534143 FAM9BQ8IZU0 186 aa8.17□□□□□ -1.1
CMTM1-220ENST00000534143 SNIP1Q8TAD8 396 aaKnown RBP8.17□□□□□ -1.1
CMTM1-220ENST00000534143 ADAMTS8Q9UP79 889 aa8.17□□□□□ -1.1
CMTM1-220ENST00000534143 COL22A1Q8NFW1 1626 aaPredicted RBP8.17□□□□□ -1.1
CMTM1-220ENST00000534143 ABCA3Q99758 1704 aa8.17□□□□□ -1.1
CMTM1-220ENST00000534143 COL18A1P39060 1754 aa8.17□□□□□ -1.1
CMTM1-220ENST00000534143 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
CMTM1-220ENST00000534143 DIAPH1O60610 1272 aaKnown RBP8.16□□□□□ -1.1
CMTM1-220ENST00000534143 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
CMTM1-220ENST00000534143 HOXC9P31274 260 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 FLT4P35916 1363 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 SH3BP2P78314 561 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 HSP90AB2PQ58FF8 381 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 IP6K1Q92551 441 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 RGPD5Q99666 1765 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
CMTM1-220ENST00000534143 RTL1A6NKG5 1358 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 CPDO75976 1380 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-220ENST00000534143 CTHP32929 405 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 AMPHP49418 695 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 NEUROD2Q15784 382 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-220ENST00000534143 BAP1Q92560 729 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 TSC1Q92574 1164 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
CMTM1-220ENST00000534143 NUDCQ9Y266 331 aa8.15□□□□□ -1.1
CMTM1-220ENST00000534143 RGPD1P0DJD0 1748 aa8.15□□□□□ -1.11
CMTM1-220ENST00000534143 ZC3H6P61129 1189 aaKnown RBP8.14□□□□□ -1.11
CMTM1-220ENST00000534143 EIF4A2Q14240 407 aaKnown RBP8.14□□□□□ -1.11
CMTM1-220ENST00000534143 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
CMTM1-220ENST00000534143 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CMTM1-220ENST00000534143 ABCC6O95255 1503 aa8.13□□□□□ -1.11
CMTM1-220ENST00000534143 BLMP54132 1417 aaPredicted RBP8.13□□□□□ -1.11
CMTM1-220ENST00000534143 SPATA31A6Q5VVP1 1343 aa8.13□□□□□ -1.11
CMTM1-220ENST00000534143 AVPP01185 164 aa8.13□□□□□ -1.11
CMTM1-220ENST00000534143 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
CMTM1-220ENST00000534143 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
CMTM1-220ENST00000534143 PPP2R2DQ66LE6 453 aa8.13□□□□□ -1.11
CMTM1-220ENST00000534143 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
CMTM1-220ENST00000534143 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 KIAA0232Q92628 1395 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 U2SURPO15042 1029 aaKnown RBP8.12□□□□□ -1.11
CMTM1-220ENST00000534143 SIAH2O43255 324 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 U2AF1L5P0DN76 240 aaPredicted RBP8.12□□□□□ -1.11
CMTM1-220ENST00000534143 SMPD1P17405 629 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 U2AF1Q01081 240 aaKnown RBP eCLIP8.12□□□□□ -1.11
CMTM1-220ENST00000534143 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 ZNF511Q8NB15 262 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 PLEKHF1Q96S99 279 aa8.12□□□□□ -1.11
CMTM1-220ENST00000534143 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 J3QL48 77 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 RUNDC1Q96C34 613 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 YTHDC1Q96MU7 727 aaKnown RBP8.11□□□□□ -1.11
CMTM1-220ENST00000534143 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 CAMTA1Q9Y6Y1 1673 aa8.11□□□□□ -1.11
CMTM1-220ENST00000534143 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
CMTM1-220ENST00000534143 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 NCAPD2Q15021 1401 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 COL14A1Q05707 1796 aaKnown RBP8.1□□□□□ -1.11
CMTM1-220ENST00000534143 KDRP35968 1356 aa8.1□□□□□ -1.11
CMTM1-220ENST00000534143 HMOX1P09601 288 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 NBPF6Q5VWK0 638 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 SULT6B1Q6IMI4 303 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
CMTM1-220ENST00000534143 LTV1Q96GA3 475 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms