RNA–Protein interactions for RNA: ENST00000534103.5

RAB30-213, Transcript of RAB30, member RAS oncogene family, human

TSL 4

Gene RAB30, Length 673 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB30-213	ENST00000534103	TMX4	Q9H1E5	349 aa	Predicted RBP	11.47	□□□□□ -0.57
RAB30-213	ENST00000534103	TAOK3	Q9H2K8	898 aa		11.47	□□□□□ -0.57
RAB30-213	ENST00000534103	IL16	Q14005	1332 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	KLRG2	A4D1S0	409 aa	Predicted RBP	11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	ELL2	O00472	640 aa	Predicted RBP	11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	NTSR2	O95665	410 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	DDX58	O95786	925 aa	Known RBP	11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	TCIRG1	Q13488	830 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	CCDC30	Q5VVM6	783 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	SUSD4	Q5VX71	490 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	ANKRD13D	Q6ZTN6	518 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	LRP10	Q7Z4F1	713 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	WWC1	Q8IX03	1113 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	PLBD2	Q8NHP8	589 aa		11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	RBM17	Q96I25	401 aa	Known RBP	11.46	□□□□□ -0.57
RAB30-213	ENST00000534103	CEP350	Q5VT06	3117 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	SH3TC1	Q8TE82	1336 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	LTBP3	Q9NS15	1303 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	NFKBIE	O00221	500 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	RIC3	Q7Z5B4	369 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	NLRP3	Q96P20	1036 aa		11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	TRMT112	Q9UI30	125 aa	Known RBP	11.45	□□□□□ -0.58
RAB30-213	ENST00000534103	LAMB2	P55268	1798 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	SENP3-EIF4A1	A0A087X0R7	540 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	HSP90B1	P14625	803 aa	Known RBP	11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	CC2D2B	Q6DHV5	1058 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	NLRP10	Q86W26	655 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	WDR63	Q8IWG1	891 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	RTKN2	Q8IZC4	609 aa		11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	TSR2	Q969E8	191 aa	Known RBP	11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	SALL2	Q9Y467	1007 aa	Predicted RBP	11.44	□□□□□ -0.58
RAB30-213	ENST00000534103	CRY2	Q49AN0	593 aa		11.43	□□□□□ -0.58
RAB30-213	ENST00000534103	GRIPAP1	Q4V328	841 aa		11.43	□□□□□ -0.58
RAB30-213	ENST00000534103	DPY19L2	Q6NUT2	758 aa		11.43	□□□□□ -0.58
RAB30-213	ENST00000534103	C8orf58	Q8NAV2	365 aa		11.43	□□□□□ -0.58
RAB30-213	ENST00000534103	PPEF1	O14829	653 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	HOXA10	P31260	410 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	TWISTNB	Q3B726	338 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	CRAMP1	Q96RY5	1269 aa		11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	MYH16	Q9H6N6	1097 aa		11.42	□□□□□ -0.58
RAB30-213	ENST00000534103	FANCI	Q9NVI1	1328 aa		11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	ATP5J2-PTCD1	G3V325	749 aa		11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	NEXN	Q0ZGT2	675 aa		11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	SLC10A5	Q5PT55	438 aa		11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	DDX46	Q7L014	1031 aa	Known RBP	11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	NMRK2	Q9NPI5	230 aa		11.41	□□□□□ -0.58
RAB30-213	ENST00000534103	DDX60	Q8IY21	1712 aa	Known RBP	11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	GLTPD2	A6NH11	291 aa		11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	KIF3C	O14782	793 aa		11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	TOMM70	O94826	608 aa		11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	HCLS1	P14317	486 aa	Predicted RBP	11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	ISCA1	Q9BUE6	129 aa		11.4	□□□□□ -0.58
RAB30-213	ENST00000534103	MYH3	P11055	1940 aa		11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	TCERG1	O14776	1098 aa	Known RBP	11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	TRIM28	Q13263	835 aa	Known RBP	11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	TSPYL6	Q8N831	410 aa		11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	C7orf43	Q8WVR3	580 aa		11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	JDP2	Q8WYK2	163 aa		11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	MYD88	Q99836	296 aa		11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	PHAX	Q9H814	394 aa	Known RBP	11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	CWC25	Q9NXE8	425 aa	Predicted RBP	11.39	□□□□□ -0.59
RAB30-213	ENST00000534103	ABCC4	O15439	1325 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	BBOX1	O75936	387 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	VEGFA	P15692	232 aa	Predicted RBP	11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	IARS	P41252	1262 aa	Known RBP	11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	C3orf67	Q6ZVT6	689 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	TMC4	Q7Z404	712 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	CCDC191	Q8NCU4	936 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	SUPT20H	Q8NEM7	779 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	RBM46	Q8TBY0	533 aa	Known RBP	11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	FAM89A	Q96GI7	184 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	PSMD1	Q99460	953 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	RRAGC	Q9HB90	399 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	MAP3K2	Q9Y2U5	619 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	WDR90	Q96KV7	1748 aa		11.38	□□□□□ -0.59
RAB30-213	ENST00000534103	IRS4	O14654	1257 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	SLC4A2	P04920	1241 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	PRELP	P51888	382 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	GRAP	Q13588	217 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	RTL5	Q5HYW3	569 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	OLFM4	Q6UX06	510 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	KSR2	Q6VAB6	950 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	SYNE4	Q8N205	404 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	GRAPL	Q8TC17	118 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	ZNF428	Q96B54	188 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	METTL22	Q9BUU2	404 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	ATP6V0A2	Q9Y487	856 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	TAF1	P21675	1872 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	SCN4A	P35499	1836 aa		11.37	□□□□□ -0.59
RAB30-213	ENST00000534103	PI4KAP2	A4QPH2	592 aa		11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	IQCA1L	A6NCM1	817 aa		11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	CCER2	I3L3R5	266 aa		11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	HSPA6	P17066	643 aa		11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	EIF6	P56537	245 aa	Known RBP	11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	EXOSC9	Q06265	439 aa	Known RBP	11.36	□□□□□ -0.59
RAB30-213	ENST00000534103	FKBP5	Q13451	457 aa	Predicted RBP	11.36	□□□□□ -0.59

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