RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 RRBP1Q9P2E9 1410 aaKnown RBP8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 LRRC69Q6ZNQ3 347 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 IQGAP2Q13576 1575 aa8.39□□□□□ -1.07
CLNS1A-212ENST00000533957 ARAP1Q96P48 1450 aa8.38□□□□□ -1.07
CLNS1A-212ENST00000533957 SERTM1A2A2V5 107 aa8.38□□□□□ -1.07
CLNS1A-212ENST00000533957 FLIIQ13045 1269 aa8.38□□□□□ -1.07
CLNS1A-212ENST00000533957 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
CLNS1A-212ENST00000533957 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
CLNS1A-212ENST00000533957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 CLDN10P78369 228 aa8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 SH3PXD2AQ5TCZ1 1133 aa8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 CHMP7Q8WUX9 453 aaPredicted RBP8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 KIAA1024Q9UPX6 916 aa8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 GPC6Q9Y625 555 aaPredicted RBP8.37□□□□□ -1.07
CLNS1A-212ENST00000533957 FURINP09958 794 aa8.36□□□□□ -1.07
CLNS1A-212ENST00000533957 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
CLNS1A-212ENST00000533957 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
CLNS1A-212ENST00000533957 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 USP17L3A6NCW0 530 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 USP17L4A6NCW7 530 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 ELOA3DA6NLF2 546 aaPredicted RBP8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 ALAS2P22557 587 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 ELOA3BQ3SY89 546 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 USP17L1Q7RTZ2 530 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 MDFIQ99750 246 aa8.35□□□□□ -1.07
CLNS1A-212ENST00000533957 KIAA0586Q9BVV6 1533 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 ATP9BO43861 1147 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 C1orf53Q5VUE5 145 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 OGFOD1Q8N543 542 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 PLVAPQ9BX97 442 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 HCN4Q9Y3Q4 1203 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 CARMIL1Q5VZK9 1371 aa8.34□□□□□ -1.07
CLNS1A-212ENST00000533957 KIAA0556O60303 1618 aa8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 SIN3BO75182 1162 aa8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 CHRNA4P43681 627 aa8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 RHPN1Q8TCX5 695 aa8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
CLNS1A-212ENST00000533957 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
CLNS1A-212ENST00000533957 M0R2N6 131 aa8.32□□□□□ -1.08
CLNS1A-212ENST00000533957 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
CLNS1A-212ENST00000533957 UGGT2Q9NYU1 1516 aa8.32□□□□□ -1.08
CLNS1A-212ENST00000533957 CCNB3Q8WWL7 1395 aa8.32□□□□□ -1.08
CLNS1A-212ENST00000533957 HIRAP54198 1017 aaPredicted RBP8.31□□□□□ -1.08
CLNS1A-212ENST00000533957 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
CLNS1A-212ENST00000533957 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
CLNS1A-212ENST00000533957 SAMD9Q5K651 1589 aa8.31□□□□□ -1.08
CLNS1A-212ENST00000533957 EFCAB5A4FU69 1503 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 DKK1O94907 266 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 TSEN2Q8NCE0 465 aaKnown RBP8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
CLNS1A-212ENST00000533957 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 STARD13Q9Y3M8 1113 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 ARHGAP35Q9NRY4 1499 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
CLNS1A-212ENST00000533957 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 C21orf2O43822 256 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 KCNQ4P56696 695 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 XP32Q5T750 250 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 ZNF594Q96JF6 807 aaPredicted RBP8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 HSH2DQ96JZ2 352 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 TFIP11Q9UBB9 837 aaKnown RBP8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 DISP1Q96F81 1524 aa8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
CLNS1A-212ENST00000533957 KIF13AQ9H1H9 1805 aa8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 DHX57Q6P158 1386 aaKnown RBP8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 M0R082 166 aa8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 NEUROD1Q13562 356 aa8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 ZNF417Q8TAU3 575 aa8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 ZNF587Q96SQ5 575 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 KCNH4Q9UQ05 1017 aa8.27□□□□□ -1.09
CLNS1A-212ENST00000533957 RBM19Q9Y4C8 960 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms