RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 NEFMP07197 916 aa19■□□□□ 0.63
SHARPIN-208ENST00000533948 CRY2Q49AN0 593 aa19■□□□□ 0.63
SHARPIN-208ENST00000533948 PSMD1Q99460 953 aa19■□□□□ 0.63
SHARPIN-208ENST00000533948 NYXQ9GZU5 481 aa19■□□□□ 0.63
SHARPIN-208ENST00000533948 DDX21Q9NR30 783 aaKnown RBP eCLIP19■□□□□ 0.63
SHARPIN-208ENST00000533948 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
SHARPIN-208ENST00000533948 EPS15P42566 896 aa18.99■□□□□ 0.63
SHARPIN-208ENST00000533948 CC2D2BQ6DHV5 1058 aa18.99■□□□□ 0.63
SHARPIN-208ENST00000533948 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 SCNN1DP51172 638 aa18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 EIF6P56537 245 aaKnown RBP18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 MAP2K1Q02750 393 aaPredicted RBP18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 THSD7BQ9C0I4 1608 aa18.98■□□□□ 0.63
SHARPIN-208ENST00000533948 NUP98P52948 1817 aa18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 ERVV-1B6SEH8 477 aa18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 TRAF5O00463 557 aa18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 GRM1Q13255 1194 aa18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 PAXIP1Q6ZW49 1069 aaPredicted RBP18.97■□□□□ 0.63
SHARPIN-208ENST00000533948 GPTP24298 496 aa18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 LMOD1P29536 600 aaPredicted RBP18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 CYP4F22Q6NT55 531 aa18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 TTLL7Q6ZT98 887 aa18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 RPGRQ92834 1020 aaKnown RBP18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 CAPNS2Q96L46 248 aa18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 UBN2Q6ZU65 1347 aa18.96■□□□□ 0.63
SHARPIN-208ENST00000533948 KIF6Q6ZMV9 814 aa18.95■□□□□ 0.62
SHARPIN-208ENST00000533948 C3orf67Q6ZVT6 689 aa18.95■□□□□ 0.62
SHARPIN-208ENST00000533948 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
SHARPIN-208ENST00000533948 TSKSQ9UJT2 592 aa18.95■□□□□ 0.62
SHARPIN-208ENST00000533948 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
SHARPIN-208ENST00000533948 CST9Q5W186 159 aa18.94■□□□□ 0.62
SHARPIN-208ENST00000533948 TMX4Q9H1E5 349 aaPredicted RBP18.94■□□□□ 0.62
SHARPIN-208ENST00000533948 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
SHARPIN-208ENST00000533948 MAP3K15Q6ZN16 1313 aa18.94■□□□□ 0.62
SHARPIN-208ENST00000533948 RIC1Q4ADV7 1423 aa18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 SUSD4Q5VX71 490 aa18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 RBM17Q96I25 401 aaKnown RBP18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 ZBTB3Q9H5J0 574 aa18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
SHARPIN-208ENST00000533948 MYL6BP14649 208 aa18.92■□□□□ 0.62
SHARPIN-208ENST00000533948 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
SHARPIN-208ENST00000533948 AOC2O75106 756 aa18.91■□□□□ 0.62
SHARPIN-208ENST00000533948 SLC34A2O95436 690 aa18.91■□□□□ 0.62
SHARPIN-208ENST00000533948 AOC3Q16853 763 aa18.91■□□□□ 0.62
SHARPIN-208ENST00000533948 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 CCDC85CA6NKD9 419 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 PPIP5K2O43314 1243 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 NTSR2O95665 410 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 NIM1KQ8IY84 436 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 CRAMP1Q96RY5 1269 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 TLL2Q9Y6L7 1015 aa18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 IBTKQ9P2D0 1353 aaPredicted RBP18.9■□□□□ 0.62
SHARPIN-208ENST00000533948 ECE1P42892 770 aa18.89■□□□□ 0.61
SHARPIN-208ENST00000533948 PPP1R42Q7Z4L9 355 aa18.89■□□□□ 0.61
SHARPIN-208ENST00000533948 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
SHARPIN-208ENST00000533948 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
SHARPIN-208ENST00000533948 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
SHARPIN-208ENST00000533948 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
SHARPIN-208ENST00000533948 GPRC5DQ9NZD1 345 aa18.88■□□□□ 0.61
SHARPIN-208ENST00000533948 CELF2O95319 508 aaKnown RBP18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 CXCL9Q07325 125 aa18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 PARP10Q53GL7 1025 aa18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 GIGYF2Q6Y7W6 1299 aaKnown RBP18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 GLIS2Q9BZE0 524 aaPredicted RBP18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 ADARB2Q9NS39 739 aaKnown RBP18.86■□□□□ 0.61
SHARPIN-208ENST00000533948 GMPSP49915 693 aaPredicted RBP18.85■□□□□ 0.61
SHARPIN-208ENST00000533948 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
SHARPIN-208ENST00000533948 SAPCD2Q86UD0 394 aa18.85■□□□□ 0.61
SHARPIN-208ENST00000533948 ATP6V0A2Q9Y487 856 aa18.85■□□□□ 0.61
SHARPIN-208ENST00000533948 ABCC4O15439 1325 aa18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 ERBB4Q15303 1308 aa18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 MLLT1Q03111 559 aaPredicted RBP18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 SUPT20HQ8NEM7 779 aa18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 CASP8AP2Q9UKL3 1982 aa18.84■□□□□ 0.61
SHARPIN-208ENST00000533948 MAP2K2P36507 400 aa18.83■□□□□ 0.6
SHARPIN-208ENST00000533948 PLEKHF1Q96S99 279 aa18.83■□□□□ 0.6
SHARPIN-208ENST00000533948 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.6
SHARPIN-208ENST00000533948 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.6
SHARPIN-208ENST00000533948 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 SHTN1A0MZ66 631 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 BBOX1O75936 387 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 RGS19P49795 217 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 HIRAP54198 1017 aaPredicted RBP18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 TRPM4Q8TD43 1214 aa18.82■□□□□ 0.6
SHARPIN-208ENST00000533948 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms