RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
PACS1-214ENST00000533811 GPR101Q96P66 508 aaPredicted RBP12.37□□□□□ -0.43
PACS1-214ENST00000533811 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 COL4A5P29400 1685 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 NUP98P52948 1817 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 THSD7BQ9C0I4 1608 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
PACS1-214ENST00000533811 TRAF5O00463 557 aa12.36□□□□□ -0.43
PACS1-214ENST00000533811 PER1O15534 1290 aaPredicted RBP12.36□□□□□ -0.43
PACS1-214ENST00000533811 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
PACS1-214ENST00000533811 PSMD1Q99460 953 aa12.36□□□□□ -0.43
PACS1-214ENST00000533811 RSPH6AQ9H0K4 717 aa12.36□□□□□ -0.43
PACS1-214ENST00000533811 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 AOC2O75106 756 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 SCNN1DP51172 638 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
PACS1-214ENST00000533811 GPTP24298 496 aa12.34□□□□□ -0.43
PACS1-214ENST00000533811 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
PACS1-214ENST00000533811 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
PACS1-214ENST00000533811 SNED1Q8TER0 1413 aa12.34□□□□□ -0.43
PACS1-214ENST00000533811 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
PACS1-214ENST00000533811 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
PACS1-214ENST00000533811 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
PACS1-214ENST00000533811 CST9Q5W186 159 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
PACS1-214ENST00000533811 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
PACS1-214ENST00000533811 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
PACS1-214ENST00000533811 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
PACS1-214ENST00000533811 RGL2O15211 777 aa12.32□□□□□ -0.44
PACS1-214ENST00000533811 CELF2O95319 508 aaKnown RBP12.32□□□□□ -0.44
PACS1-214ENST00000533811 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
PACS1-214ENST00000533811 RBM17Q96I25 401 aaKnown RBP12.32□□□□□ -0.44
PACS1-214ENST00000533811 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
PACS1-214ENST00000533811 ZNF408Q9H9D4 720 aa12.32□□□□□ -0.44
PACS1-214ENST00000533811 AOC3Q16853 763 aa12.31□□□□□ -0.44
PACS1-214ENST00000533811 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
PACS1-214ENST00000533811 MCOLN1Q9GZU1 580 aa12.31□□□□□ -0.44
PACS1-214ENST00000533811 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
PACS1-214ENST00000533811 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
PACS1-214ENST00000533811 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
PACS1-214ENST00000533811 MYL6BP14649 208 aa12.3□□□□□ -0.44
PACS1-214ENST00000533811 MAP2K2P36507 400 aa12.3□□□□□ -0.44
PACS1-214ENST00000533811 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
PACS1-214ENST00000533811 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
PACS1-214ENST00000533811 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
PACS1-214ENST00000533811 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
PACS1-214ENST00000533811 UBN2Q6ZU65 1347 aa12.3□□□□□ -0.44
PACS1-214ENST00000533811 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
PACS1-214ENST00000533811 DGKZQ13574 1117 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
PACS1-214ENST00000533811 RGS19P49795 217 aa12.28□□□□□ -0.44
PACS1-214ENST00000533811 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
PACS1-214ENST00000533811 CIAPIN1Q6FI81 312 aa12.28□□□□□ -0.44
PACS1-214ENST00000533811 SAPCD2Q86UD0 394 aa12.28□□□□□ -0.44
PACS1-214ENST00000533811 CA12O43570 354 aa12.27□□□□□ -0.45
PACS1-214ENST00000533811 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.45
PACS1-214ENST00000533811 NTSR2O95665 410 aa12.27□□□□□ -0.45
PACS1-214ENST00000533811 CXCL9Q07325 125 aa12.27□□□□□ -0.45
PACS1-214ENST00000533811 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
PACS1-214ENST00000533811 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
PACS1-214ENST00000533811 RAD17O75943 681 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 NEFMP07197 916 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 ZNRF3Q9ULT6 936 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
PACS1-214ENST00000533811 LAMB2P55268 1798 aa12.25□□□□□ -0.45
PACS1-214ENST00000533811 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
PACS1-214ENST00000533811 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
PACS1-214ENST00000533811 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
PACS1-214ENST00000533811 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
PACS1-214ENST00000533811 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
PACS1-214ENST00000533811 ABCC4O15439 1325 aa12.25□□□□□ -0.45
PACS1-214ENST00000533811 TAF1P21675 1872 aa12.25□□□□□ -0.45
PACS1-214ENST00000533811 POLR2AP24928 1970 aaKnown RBP12.25□□□□□ -0.45
PACS1-214ENST00000533811 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
PACS1-214ENST00000533811 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
PACS1-214ENST00000533811 HUNKP57058 714 aa12.24□□□□□ -0.45
PACS1-214ENST00000533811 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
PACS1-214ENST00000533811 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
PACS1-214ENST00000533811 USP48Q86UV5 1035 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms