RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PLIN1O60240 522 aa13.9□□□□□ -0.18
CCDC90B-218ENST00000533761 KCNQ4P56696 695 aa13.9□□□□□ -0.18
CCDC90B-218ENST00000533761 ITPK1Q13572 414 aa13.9□□□□□ -0.18
CCDC90B-218ENST00000533761 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
CCDC90B-218ENST00000533761 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
CCDC90B-218ENST00000533761 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
CCDC90B-218ENST00000533761 SOCS7O14512 581 aa13.89□□□□□ -0.19
CCDC90B-218ENST00000533761 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
CCDC90B-218ENST00000533761 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
CCDC90B-218ENST00000533761 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 API5Q9BZZ5 524 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 PTPRCP08575 1304 aa13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 DZIP1LQ8IYY4 767 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-218ENST00000533761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-218ENST00000533761 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-218ENST00000533761 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-218ENST00000533761 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-218ENST00000533761 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
CCDC90B-218ENST00000533761 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 C5P01031 1676 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 AK7Q96M32 723 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 TJP1Q07157 1748 aa13.85□□□□□ -0.19
CCDC90B-218ENST00000533761 TRIM27P14373 513 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 NPM2Q86SE8 214 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 DDX19BQ9UMR2 479 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 RREB1Q92766 1687 aa13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-218ENST00000533761 RIOK3O14730 519 aaKnown RBP13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 GNPATO15228 680 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 A1BGP04217 495 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 NECTIN2Q92692 538 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 CRBNQ96SW2 442 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 DBF4Q9UBU7 674 aaPredicted RBP13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 C4BP0C0L5 1744 aa13.83□□□□□ -0.19
CCDC90B-218ENST00000533761 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
CCDC90B-218ENST00000533761 PSEN2P49810 448 aa13.83□□□□□ -0.2
CCDC90B-218ENST00000533761 SLC15A2Q16348 729 aa13.83□□□□□ -0.2
CCDC90B-218ENST00000533761 EXOC6Q8TAG9 804 aa13.83□□□□□ -0.2
CCDC90B-218ENST00000533761 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
CCDC90B-218ENST00000533761 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
CCDC90B-218ENST00000533761 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-218ENST00000533761 C20orf194Q5TEA3 1177 aa13.82□□□□□ -0.2
CCDC90B-218ENST00000533761 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
CCDC90B-218ENST00000533761 ITPRIPQ8IWB1 547 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 FLAD1Q8NFF5 587 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 CHPF2Q9P2E5 772 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 MYH14Q7Z406 1995 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-218ENST00000533761 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 MYL6BP14649 208 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 SSFA2P28290 1259 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 ABCC4O15439 1325 aa13.8□□□□□ -0.2
CCDC90B-218ENST00000533761 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 FLIIQ13045 1269 aa13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 FKBP5Q13451 457 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 PDIA6Q15084 440 aa13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 A0A087WZG4 1122 aa13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 PTPN5P54829 565 aa13.79□□□□□ -0.2
CCDC90B-218ENST00000533761 PHF14O94880 888 aa13.78□□□□□ -0.2
CCDC90B-218ENST00000533761 RFC4P35249 363 aa13.78□□□□□ -0.2
CCDC90B-218ENST00000533761 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-218ENST00000533761 ARXQ96QS3 562 aa13.78□□□□□ -0.2
CCDC90B-218ENST00000533761 ANXA1P04083 346 aa13.77□□□□□ -0.21
CCDC90B-218ENST00000533761 PROSER3Q2NL68 480 aa13.77□□□□□ -0.21
CCDC90B-218ENST00000533761 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms