RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
SF3B2-214ENST00000533595 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
SF3B2-214ENST00000533595 CWC25Q9NXE8 425 aaPredicted RBP18.54■□□□□ 0.56
SF3B2-214ENST00000533595 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
SF3B2-214ENST00000533595 BCAR3O75815 825 aa18.53■□□□□ 0.56
SF3B2-214ENST00000533595 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
SF3B2-214ENST00000533595 PDE6BP35913 854 aa18.53■□□□□ 0.56
SF3B2-214ENST00000533595 LINS1Q8NG48 757 aa18.53■□□□□ 0.56
SF3B2-214ENST00000533595 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
SF3B2-214ENST00000533595 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.56
SF3B2-214ENST00000533595 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 NEURL1BA8MQ27 555 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 DPEP1P16444 411 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 CWF19L2Q2TBE0 894 aaKnown RBP18.52■□□□□ 0.56
SF3B2-214ENST00000533595 SLC4A10Q6U841 1118 aa18.52■□□□□ 0.56
SF3B2-214ENST00000533595 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
SF3B2-214ENST00000533595 ANKRD31Q8N7Z5 1873 aa18.52■□□□□ 0.55
SF3B2-214ENST00000533595 H0YIN7 160 aa18.51■□□□□ 0.55
SF3B2-214ENST00000533595 CHRNA5P30532 468 aa18.51■□□□□ 0.55
SF3B2-214ENST00000533595 BEND3Q5T5X7 828 aa18.51■□□□□ 0.55
SF3B2-214ENST00000533595 C2CD5Q86YS7 1000 aa18.51■□□□□ 0.55
SF3B2-214ENST00000533595 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
SF3B2-214ENST00000533595 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
SF3B2-214ENST00000533595 KIAA1551Q9HCM1 1747 aa18.5■□□□□ 0.55
SF3B2-214ENST00000533595 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
SF3B2-214ENST00000533595 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
SF3B2-214ENST00000533595 SYNE4Q8N205 404 aa18.5■□□□□ 0.55
SF3B2-214ENST00000533595 ZBTB38Q8NAP3 1195 aaPredicted RBP18.5■□□□□ 0.55
SF3B2-214ENST00000533595 ARHGAP45Q92619 1136 aa18.5■□□□□ 0.55
SF3B2-214ENST00000533595 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
SF3B2-214ENST00000533595 API5Q9BZZ5 524 aaKnown RBP18.5■□□□□ 0.55
SF3B2-214ENST00000533595 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
SF3B2-214ENST00000533595 PCCAP05165 728 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-214ENST00000533595 GCKRQ14397 625 aa18.49■□□□□ 0.55
SF3B2-214ENST00000533595 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-214ENST00000533595 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-214ENST00000533595 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
SF3B2-214ENST00000533595 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
SF3B2-214ENST00000533595 KCNA3P22001 575 aa18.48■□□□□ 0.55
SF3B2-214ENST00000533595 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
SF3B2-214ENST00000533595 RCAN3Q9UKA8 241 aa18.48■□□□□ 0.55
SF3B2-214ENST00000533595 ALDH1L1O75891 902 aa18.47■□□□□ 0.55
SF3B2-214ENST00000533595 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
SF3B2-214ENST00000533595 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
SF3B2-214ENST00000533595 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
SF3B2-214ENST00000533595 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-214ENST00000533595 SRGNP10124 158 aa18.46■□□□□ 0.55
SF3B2-214ENST00000533595 ATF7IPQ6VMQ6 1270 aa18.46■□□□□ 0.55
SF3B2-214ENST00000533595 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-214ENST00000533595 MASTLQ96GX5 879 aa18.46■□□□□ 0.55
SF3B2-214ENST00000533595 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
SF3B2-214ENST00000533595 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
SF3B2-214ENST00000533595 H7C1W4 665 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 NPR1P16066 1061 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 ZKSCAN2Q63HK3 967 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
SF3B2-214ENST00000533595 ZNF622Q969S3 477 aaKnown RBP eCLIP18.45■□□□□ 0.546e-12■■□□□ 13.5
SF3B2-214ENST00000533595 COL11A2P13942 1736 aaPredicted RBP18.45■□□□□ 0.54
SF3B2-214ENST00000533595 CDHR2Q9BYE9 1310 aa18.45■□□□□ 0.54
SF3B2-214ENST00000533595 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
SF3B2-214ENST00000533595 TRIM27P14373 513 aa18.44■□□□□ 0.54
SF3B2-214ENST00000533595 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
SF3B2-214ENST00000533595 DALRD3Q5D0E6 543 aaKnown RBP18.44■□□□□ 0.54
SF3B2-214ENST00000533595 STYK1Q6J9G0 422 aa18.44■□□□□ 0.54
SF3B2-214ENST00000533595 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
SF3B2-214ENST00000533595 DLEC1Q9Y238 1755 aa18.44■□□□□ 0.54
SF3B2-214ENST00000533595 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
SF3B2-214ENST00000533595 GPR162Q16538 588 aa18.43■□□□□ 0.54
SF3B2-214ENST00000533595 TTLL6Q8N841 843 aa18.43■□□□□ 0.54
SF3B2-214ENST00000533595 C9orf78Q9NZ63 289 aaPredicted RBP18.43■□□□□ 0.54
SF3B2-214ENST00000533595 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
SF3B2-214ENST00000533595 GRM8O00222 908 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 PDE8AO60658 829 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 CASP7P55210 303 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 ABCC4O15439 1325 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 LAMB2P55268 1798 aa18.42■□□□□ 0.54
SF3B2-214ENST00000533595 UTRNP46939 3433 aa18.41■□□□□ 0.54
SF3B2-214ENST00000533595 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.546e-11■□□□□ 9.7
SF3B2-214ENST00000533595 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
SF3B2-214ENST00000533595 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
SF3B2-214ENST00000533595 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
SF3B2-214ENST00000533595 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
SF3B2-214ENST00000533595 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
SF3B2-214ENST00000533595 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
SF3B2-214ENST00000533595 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
SF3B2-214ENST00000533595 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
SF3B2-214ENST00000533595 CRAMP1Q96RY5 1269 aa18.39■□□□□ 0.53
SF3B2-214ENST00000533595 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
SF3B2-214ENST00000533595 NBPF7P0C2Y1 421 aaPredicted RBP18.38■□□□□ 0.53
SF3B2-214ENST00000533595 CTSWP56202 376 aa18.38■□□□□ 0.53
SF3B2-214ENST00000533595 CCDC152Q4G0S7 254 aa18.38■□□□□ 0.53
SF3B2-214ENST00000533595 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
SF3B2-214ENST00000533595 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms