RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 H7C1W4 665 aa16.67■□□□□ 0.26
CDC27-210ENST00000533415 SASH1O94885 1247 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
CDC27-210ENST00000533415 CCDC8Q9H0W5 538 aaPredicted RBP16.66■□□□□ 0.26
CDC27-210ENST00000533415 LRRC4BQ9NT99 713 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
CDC27-210ENST00000533415 PDE1AP54750 535 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 BTAF1O14981 1849 aa16.66■□□□□ 0.26
CDC27-210ENST00000533415 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
CDC27-210ENST00000533415 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
CDC27-210ENST00000533415 GNPATO15228 680 aa16.65■□□□□ 0.26
CDC27-210ENST00000533415 SMARCC1Q92922 1105 aaPredicted RBP16.65■□□□□ 0.26
CDC27-210ENST00000533415 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
CDC27-210ENST00000533415 SDSP20132 328 aa16.64■□□□□ 0.25
CDC27-210ENST00000533415 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
CDC27-210ENST00000533415 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
CDC27-210ENST00000533415 MTX1Q13505 466 aa16.64■□□□□ 0.25
CDC27-210ENST00000533415 CCDC191Q8NCU4 936 aa16.64■□□□□ 0.25
CDC27-210ENST00000533415 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
CDC27-210ENST00000533415 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
CDC27-210ENST00000533415 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
CDC27-210ENST00000533415 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
CDC27-210ENST00000533415 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
CDC27-210ENST00000533415 MX1P20591 662 aa16.63■□□□□ 0.25
CDC27-210ENST00000533415 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
CDC27-210ENST00000533415 SUSD4Q5VX71 490 aa16.63■□□□□ 0.25
CDC27-210ENST00000533415 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
CDC27-210ENST00000533415 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
CDC27-210ENST00000533415 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 AACSQ86V21 672 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 RILPL2Q969X0 211 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 TFCP2Q12800 502 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 G3BP1Q13283 466 aaKnown RBP eCLIP16.62■□□□□ 0.254e-6■□□□□ 9.2
CDC27-210ENST00000533415 POTEAQ6S8J7 498 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
CDC27-210ENST00000533415 COL15A1P39059 1388 aa16.62■□□□□ 0.25
CDC27-210ENST00000533415 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
CDC27-210ENST00000533415 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
CDC27-210ENST00000533415 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
CDC27-210ENST00000533415 NIP7Q9Y221 180 aaKnown RBP eCLIP16.61■□□□□ 0.25
CDC27-210ENST00000533415 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
CDC27-210ENST00000533415 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
CDC27-210ENST00000533415 RABL6Q3YEC7 729 aaPredicted RBP16.6■□□□□ 0.25
CDC27-210ENST00000533415 FAM196AQ6ZSG2 479 aa16.6■□□□□ 0.25
CDC27-210ENST00000533415 GREM2Q9H772 168 aa16.6■□□□□ 0.25
CDC27-210ENST00000533415 NOP58Q9Y2X3 529 aaKnown RBP16.6■□□□□ 0.25
CDC27-210ENST00000533415 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
CDC27-210ENST00000533415 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
CDC27-210ENST00000533415 NUP98P52948 1817 aa16.59■□□□□ 0.25
CDC27-210ENST00000533415 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.25
CDC27-210ENST00000533415 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.25
CDC27-210ENST00000533415 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.25
CDC27-210ENST00000533415 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
CDC27-210ENST00000533415 PCCAP05165 728 aaPredicted RBP16.57■□□□□ 0.24
CDC27-210ENST00000533415 SLC51AQ86UW1 340 aa16.57■□□□□ 0.24
CDC27-210ENST00000533415 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
CDC27-210ENST00000533415 NHSQ6T4R5 1651 aa16.57■□□□□ 0.24
CDC27-210ENST00000533415 SNAP23O00161 211 aa16.57■□□□□ 0.24
CDC27-210ENST00000533415 CLASRPQ8N2M8 674 aaKnown RBP16.57■□□□□ 0.24
CDC27-210ENST00000533415 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
CDC27-210ENST00000533415 IL25Q9H293 177 aa16.57■□□□□ 0.24
CDC27-210ENST00000533415 CHGBP05060 677 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
CDC27-210ENST00000533415 TIMM10P62072 90 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 PROM2Q8N271 834 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
CDC27-210ENST00000533415 SEC31BQ9NQW1 1179 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 RXRBP28702 533 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
CDC27-210ENST00000533415 ATG9AQ7Z3C6 839 aa16.56■□□□□ 0.24
CDC27-210ENST00000533415 UTRNP46939 3433 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 TRIM28Q13263 835 aaKnown RBP16.55■□□□□ 0.24
CDC27-210ENST00000533415 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
CDC27-210ENST00000533415 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
CDC27-210ENST00000533415 COL5A3P25940 1745 aaPredicted RBP16.55■□□□□ 0.24
CDC27-210ENST00000533415 CDC45O75419 566 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 ITGA6P23229 1130 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 TAF7LQ5H9L4 462 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 DBNLQ9UJU6 430 aaKnown RBP16.54■□□□□ 0.24
CDC27-210ENST00000533415 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
CDC27-210ENST00000533415 AK7Q96M32 723 aa16.53■□□□□ 0.24
CDC27-210ENST00000533415 RTCBQ9Y3I0 505 aaKnown RBP16.53■□□□□ 0.24
CDC27-210ENST00000533415 CTSWP56202 376 aa16.53■□□□□ 0.24
CDC27-210ENST00000533415 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
CDC27-210ENST00000533415 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
CDC27-210ENST00000533415 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms