RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 BCAR3O75815 825 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 RIPK4P57078 832 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 STX1AQ16623 288 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 CPLX4Q7Z7G2 160 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 VCXQ9H320 206 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 STIM2Q9P246 746 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 RFC1P35251 1148 aaPredicted RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ARHGAP25P42331 645 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 PLEKHH1Q9ULM0 1364 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 USO1O60763 962 aaKnown RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 KDM4AO75164 1064 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ZNF365Q70YC5 407 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 SKAP1Q86WV1 359 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 GSTTP1A0A1W2PQM5 241 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 RNF216Q9NWF9 866 aaPredicted RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 CKAP4Q07065 602 aaKnown RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 CEP120Q8N960 986 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 DDX19AQ9NUU7 478 aaKnown RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 HIP1O00291 1037 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC158Q5M9N0 1113 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 PNISRQ8TF01 805 aaKnown RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 JADE2Q9NQC1 790 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 PPFIBP2Q8ND30 876 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 CTCFLQ8NI51 663 aaPredicted RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 NUTM2FA1L443 756 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
CSRP1-218ENST00000533402 ZFYVE16Q7Z3T8 1539 aa9□□□□□ -0.97
CSRP1-218ENST00000533402 UBE2HP62256 183 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 NUP88Q99567 741 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 FSD1Q9BTV5 496 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 TNRQ92752 1358 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 MRFAP1L1Q96HT8 127 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 ALS2CR12Q96Q35 445 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 NDUFAB1O14561 156 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 MATR3P43243 847 aaKnown RBP eCLIP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 ZBTB17Q13105 803 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 KCNH5Q8NCM2 988 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 ZNF287Q9HBT7 754 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 NUTM2BA6NNL0 878 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 NUTM2EB1AL46 878 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 DNA2P51530 1060 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 PLEKHO1Q53GL0 409 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 NUTM2AQ8IVF1 878 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 PIK3R5Q8WYR1 880 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 ZBTB9Q96C00 473 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 PDRG1Q9NUG6 133 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 PDE1CQ14123 709 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 TAOK3Q9H2K8 898 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 FKBP5Q13451 457 aaPredicted RBP8.99□□□□□ -0.97
CSRP1-218ENST00000533402 FERMT3Q86UX7 667 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 CDK5RAP3Q96JB5 506 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 PFDN1O60925 122 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 TUBBP07437 444 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 TSNAXIP1Q2TAA8 658 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 CDC42BPAQ5VT25 1732 aa8.99□□□□□ -0.97
CSRP1-218ENST00000533402 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
CSRP1-218ENST00000533402 CACNA2D3Q8IZS8 1091 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 TBC1D32Q96NH3 1257 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 C1orf115Q9H7X2 142 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 YEATS4O95619 227 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 TEX2Q8IWB9 1127 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 SH3BGRP55822 239 aaPredicted RBP8.98□□□□□ -0.97
CSRP1-218ENST00000533402 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 PPP4R3AQ6IN85 833 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
CSRP1-218ENST00000533402 MINK1Q8N4C8 1332 aaPredicted RBP8.98□□□□□ -0.97
CSRP1-218ENST00000533402 ARFGAP2Q8N6H7 521 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 CPLX3Q8WVH0 158 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 IFT74Q96LB3 600 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 SPG7Q9UQ90 795 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 ANKRD18BA2A2Z9 1011 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 CTAGE9A4FU28 777 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 GBP1P32455 592 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
CSRP1-218ENST00000533402 TACC1O75410 805 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 NUTM2DQ5VT03 806 aaPredicted RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 GIMAP6Q6P9H5 292 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 GBP7Q8N8V2 638 aaPredicted RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 SAMD15Q9P1V8 674 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 ABCC11Q96J66 1382 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 TRIM4Q9C037 500 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 JRKLQ9Y4A0 524 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 PPM1FP49593 454 aaPredicted RBP8.97□□□□□ -0.97
CSRP1-218ENST00000533402 FAM160A1Q05DH4 1040 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 TNIP1Q15025 636 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms