RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ZNF445P59923 1031 aa18.5■□□□□ 0.55
CACNA1E-208ENST00000533229 NECTIN1Q15223 517 aa18.5■□□□□ 0.55
CACNA1E-208ENST00000533229 NBPF26B4DH59 902 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 NBPF10Q6P3W6 841 aaKnown RBP18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 NBPF15Q8N660 670 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 COPRSQ9NQ92 184 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 KCNB2Q92953 911 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
CACNA1E-208ENST00000533229 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 A0A087WZG4 1122 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 LARGE1O95461 756 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 CASP7P55210 303 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 COL9A3Q14050 684 aaPredicted RBP18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 FOXD4L6Q3SYB3 417 aaPredicted RBP18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 RABL6Q3YEC7 729 aaPredicted RBP18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 FOXD4L3Q6VB84 417 aaPredicted RBP18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 TOM1L2Q6ZVM7 507 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 PKD1L3Q7Z443 1732 aa18.48■□□□□ 0.55
CACNA1E-208ENST00000533229 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 TMEM63CQ9P1W3 806 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 GLI3P10071 1580 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 RPAP1Q9BWH6 1393 aaPredicted RBP18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 DTNBO60941 627 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 TFCP2Q12800 502 aa18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 ZCRB1Q8TBF4 217 aaKnown RBP18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 DBNLQ9UJU6 430 aaKnown RBP18.47■□□□□ 0.55
CACNA1E-208ENST00000533229 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 ZSWIM6Q9HCJ5 1215 aa18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 RBM8AQ9Y5S9 174 aaKnown RBP18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 SNRKQ9NRH2 765 aa18.46■□□□□ 0.55
CACNA1E-208ENST00000533229 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 TTLL7Q6ZT98 887 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 GDPD2Q9HCC8 539 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
CACNA1E-208ENST00000533229 VPS53Q5VIR6 699 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 CREB3L3Q68CJ9 461 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 PDRG1Q9NUG6 133 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 NDUFB9Q9Y6M9 179 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 HIP1O00291 1037 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 A1BGP04217 495 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 TM6SF1Q9BZW5 370 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 TAF6LQ9Y6J9 622 aa18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 SOS2Q07890 1332 aaPredicted RBP18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 WDR33Q9C0J8 1336 aaKnown RBP18.44■□□□□ 0.54
CACNA1E-208ENST00000533229 COL15A1P39059 1388 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 RBSNQ9H1K0 784 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 SLAIN2Q9P270 581 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 CHGBP05060 677 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 ST3GAL1Q11201 340 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
CACNA1E-208ENST00000533229 SLC27A2O14975 620 aa18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 ATP5JP18859 108 aa18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 SYT1P21579 422 aa18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 FOXO4P98177 505 aa18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 COL5A2P05997 1499 aaPredicted RBP18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
CACNA1E-208ENST00000533229 ERVV-2B6SEH9 535 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 H7C1W4 665 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 GADD45BO75293 160 aaPredicted RBP18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 CCDC83Q8IWF9 413 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 DBNDD2Q9BQY9 259 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 SYCE3A1L190 88 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 KCNJ4P48050 445 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 ME3Q16798 604 aa18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
CACNA1E-208ENST00000533229 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 XIRP1Q702N8 1843 aaKnown RBP18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 STX6O43752 255 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 MBD3O95983 291 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 ZSCAN22P10073 491 aaPredicted RBP18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 IL2RBP14784 551 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
CACNA1E-208ENST00000533229 PPP1R9BQ96SB3 815 aa18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 CARD10Q9BWT7 1032 aa18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 ARFGEF2Q9Y6D5 1785 aa18.39■□□□□ 0.53
CACNA1E-208ENST00000533229 TAF5LO75529 589 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 LRSAM1Q6UWE0 723 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms