RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
SSBP3-214ENST00000533209 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 F6X3S4 739 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 H0YIN7 160 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 YBX3P16989 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
SSBP3-214ENST00000533209 SLC10A5Q5PT55 438 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
SSBP3-214ENST00000533209 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
SSBP3-214ENST00000533209 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
SSBP3-214ENST00000533209 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
SSBP3-214ENST00000533209 SRGNP10124 158 aa15.28■□□□□ 0.04
SSBP3-214ENST00000533209 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
SSBP3-214ENST00000533209 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
SSBP3-214ENST00000533209 GPR162Q16538 588 aa15.28■□□□□ 0.04
SSBP3-214ENST00000533209 CWF19L2Q2TBE0 894 aaKnown RBP15.28■□□□□ 0.04
SSBP3-214ENST00000533209 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
SSBP3-214ENST00000533209 PIM2Q9P1W9 311 aa15.28■□□□□ 0.04
SSBP3-214ENST00000533209 PTPRCP08575 1304 aa15.27■□□□□ 0.04
SSBP3-214ENST00000533209 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.04
SSBP3-214ENST00000533209 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
SSBP3-214ENST00000533209 FAM89AQ96GI7 184 aa15.27■□□□□ 0.04
SSBP3-214ENST00000533209 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.04
SSBP3-214ENST00000533209 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
SSBP3-214ENST00000533209 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-214ENST00000533209 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-214ENST00000533209 CRY2Q49AN0 593 aa15.26■□□□□ 0.03
SSBP3-214ENST00000533209 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
SSBP3-214ENST00000533209 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-214ENST00000533209 LINS1Q8NG48 757 aa15.26■□□□□ 0.03
SSBP3-214ENST00000533209 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
SSBP3-214ENST00000533209 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
SSBP3-214ENST00000533209 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-214ENST00000533209 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
SSBP3-214ENST00000533209 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
SSBP3-214ENST00000533209 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
SSBP3-214ENST00000533209 MASTLQ96GX5 879 aa15.25■□□□□ 0.03
SSBP3-214ENST00000533209 BCS1LQ9Y276 419 aa15.25■□□□□ 0.03
SSBP3-214ENST00000533209 COL11A2P13942 1736 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-214ENST00000533209 IRS4O14654 1257 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-214ENST00000533209 BCAR3O75815 825 aa15.24■□□□□ 0.03
SSBP3-214ENST00000533209 NPR1P16066 1061 aa15.24■□□□□ 0.03
SSBP3-214ENST00000533209 GCKRQ14397 625 aa15.24■□□□□ 0.03
SSBP3-214ENST00000533209 JARID2Q92833 1246 aaPredicted RBP15.24■□□□□ 0.03
SSBP3-214ENST00000533209 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
SSBP3-214ENST00000533209 NLRP3Q96P20 1036 aa15.24■□□□□ 0.03
SSBP3-214ENST00000533209 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
SSBP3-214ENST00000533209 BRCA1P38398 1863 aaKnown RBP15.23■□□□□ 0.03
SSBP3-214ENST00000533209 H7C1W4 665 aa15.23■□□□□ 0.03
SSBP3-214ENST00000533209 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
SSBP3-214ENST00000533209 DLEC1Q9Y238 1755 aa15.23■□□□□ 0.03
SSBP3-214ENST00000533209 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 HOXA10P31260 410 aaPredicted RBP15.22■□□□□ 0.03
SSBP3-214ENST00000533209 CASP7P55210 303 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 CNKSR1Q969H4 720 aa15.22■□□□□ 0.03
SSBP3-214ENST00000533209 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
SSBP3-214ENST00000533209 UBE3BQ7Z3V4 1068 aa15.21■□□□□ 0.03
SSBP3-214ENST00000533209 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
SSBP3-214ENST00000533209 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
SSBP3-214ENST00000533209 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
SSBP3-214ENST00000533209 SF3B3Q15393 1217 aaKnown RBP15.2■□□□□ 0.02
SSBP3-214ENST00000533209 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
SSBP3-214ENST00000533209 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
SSBP3-214ENST00000533209 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
SSBP3-214ENST00000533209 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
SSBP3-214ENST00000533209 UTRNP46939 3433 aa15.19■□□□□ 0.02
SSBP3-214ENST00000533209 PDE8AO60658 829 aa15.19■□□□□ 0.02
SSBP3-214ENST00000533209 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
SSBP3-214ENST00000533209 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
SSBP3-214ENST00000533209 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
SSBP3-214ENST00000533209 C21orf2O43822 256 aa15.18■□□□□ 0.02
SSBP3-214ENST00000533209 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-214ENST00000533209 PLA2G12BQ9BX93 195 aa15.18■□□□□ 0.02
SSBP3-214ENST00000533209 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
SSBP3-214ENST00000533209 ABCC4O15439 1325 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 GRM8O00222 908 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
SSBP3-214ENST00000533209 TRIM27P14373 513 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-214ENST00000533209 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
SSBP3-214ENST00000533209 LAMB2P55268 1798 aa15.16■□□□□ 0.02
SSBP3-214ENST00000533209 ARFGEF1Q9Y6D6 1849 aa15.16■□□□□ 0.02
SSBP3-214ENST00000533209 CTSWP56202 376 aa15.16■□□□□ 0.02
SSBP3-214ENST00000533209 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
SSBP3-214ENST00000533209 TTLL11Q8NHH1 800 aa15.16■□□□□ 0.02
SSBP3-214ENST00000533209 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms