RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 KIF3CO14782 793 aa22.32■■□□□ 1.16
NCAPD3-210ENST00000533155 CRY2Q49AN0 593 aa22.32■■□□□ 1.16
NCAPD3-210ENST00000533155 UTP14AQ9BVJ6 771 aaKnown RBP22.32■■□□□ 1.16
NCAPD3-210ENST00000533155 TNRC6CQ9HCJ0 1690 aaKnown RBP22.31■■□□□ 1.16
NCAPD3-210ENST00000533155 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
NCAPD3-210ENST00000533155 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
NCAPD3-210ENST00000533155 ANKRD13DQ6ZTN6 518 aa22.3■■□□□ 1.16
NCAPD3-210ENST00000533155 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
NCAPD3-210ENST00000533155 PLBD2Q8NHP8 589 aa22.3■■□□□ 1.16
NCAPD3-210ENST00000533155 C7orf43Q8WVR3 580 aa22.3■■□□□ 1.16
NCAPD3-210ENST00000533155 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
NCAPD3-210ENST00000533155 DICER1Q9UPY3 1922 aaKnown RBP22.29■■□□□ 1.16
NCAPD3-210ENST00000533155 PRELPP51888 382 aa22.29■■□□□ 1.16
NCAPD3-210ENST00000533155 NMRK2Q9NPI5 230 aa22.29■■□□□ 1.16
NCAPD3-210ENST00000533155 FAM9BQ8IZU0 186 aa22.28■■□□□ 1.16
NCAPD3-210ENST00000533155 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
NCAPD3-210ENST00000533155 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
NCAPD3-210ENST00000533155 IL16Q14005 1332 aa22.28■■□□□ 1.16
NCAPD3-210ENST00000533155 HOXA10P31260 410 aaPredicted RBP22.27■■□□□ 1.16
NCAPD3-210ENST00000533155 SLC10A5Q5PT55 438 aa22.27■■□□□ 1.16
NCAPD3-210ENST00000533155 NLRP10Q86W26 655 aa22.27■■□□□ 1.16
NCAPD3-210ENST00000533155 RTKN2Q8IZC4 609 aa22.27■■□□□ 1.16
NCAPD3-210ENST00000533155 RBM17Q96I25 401 aaKnown RBP22.27■■□□□ 1.16
NCAPD3-210ENST00000533155 GLTPD2A6NH11 291 aa22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 TOMM70O94826 608 aa22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 SALL2Q9Y467 1007 aaPredicted RBP22.26■■□□□ 1.15
NCAPD3-210ENST00000533155 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
NCAPD3-210ENST00000533155 DPY19L2Q6NUT2 758 aa22.25■■□□□ 1.15
NCAPD3-210ENST00000533155 TRMT112Q9UI30 125 aaKnown RBP22.25■■□□□ 1.15
NCAPD3-210ENST00000533155 FKBP4Q02790 459 aaKnown RBP eCLIP22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 CC2D2BQ6DHV5 1058 aa22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 WDR63Q8IWG1 891 aa22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 SH3TC1Q8TE82 1336 aa22.24■■□□□ 1.15
NCAPD3-210ENST00000533155 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
NCAPD3-210ENST00000533155 RIC3Q7Z5B4 369 aa22.23■■□□□ 1.15
NCAPD3-210ENST00000533155 PHAXQ9H814 394 aaKnown RBP22.23■■□□□ 1.15
NCAPD3-210ENST00000533155 ISCA1Q9BUE6 129 aa22.22■■□□□ 1.15
NCAPD3-210ENST00000533155 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
NCAPD3-210ENST00000533155 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
NCAPD3-210ENST00000533155 RBM46Q8TBY0 533 aaKnown RBP22.21■■□□□ 1.15
NCAPD3-210ENST00000533155 LAMB2P55268 1798 aa22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 ATP5J2-PTCD1G3V325 749 aa22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 TWISTNBQ3B726 338 aaPredicted RBP22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 OLFM4Q6UX06 510 aa22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 TMX4Q9H1E5 349 aaPredicted RBP22.2■■□□□ 1.14
NCAPD3-210ENST00000533155 PPEF1O14829 653 aaPredicted RBP22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 HCLS1P14317 486 aaPredicted RBP22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 HSPA6P17066 643 aa22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 PSMD1Q99460 953 aa22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 STK31Q9BXU1 1019 aa22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 CACNA1FO60840 1977 aa22.19■■□□□ 1.14
NCAPD3-210ENST00000533155 ZNF277Q9NRM2 450 aaPredicted RBP22.18■■□□□ 1.14
NCAPD3-210ENST00000533155 ZNF428Q96B54 188 aa22.17■■□□□ 1.14
NCAPD3-210ENST00000533155 SNED1Q8TER0 1413 aa22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 ABCC4O15439 1325 aa22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 FANCIQ9NVI1 1328 aa22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 IARSP41252 1262 aaKnown RBP22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 FAM89AQ96GI7 184 aa22.16■■□□□ 1.14
NCAPD3-210ENST00000533155 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
NCAPD3-210ENST00000533155 BBOX1O75936 387 aa22.15■■□□□ 1.14
NCAPD3-210ENST00000533155 HSP90B1P14625 803 aaKnown RBP22.15■■□□□ 1.14
NCAPD3-210ENST00000533155 FSTL1Q12841 308 aa22.15■■□□□ 1.14
NCAPD3-210ENST00000533155 MYD88Q99836 296 aa22.15■■□□□ 1.14
NCAPD3-210ENST00000533155 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.14
NCAPD3-210ENST00000533155 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
NCAPD3-210ENST00000533155 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
NCAPD3-210ENST00000533155 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
NCAPD3-210ENST00000533155 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
NCAPD3-210ENST00000533155 KSR2Q6VAB6 950 aa22.13■■□□□ 1.13
NCAPD3-210ENST00000533155 CCDC191Q8NCU4 936 aa22.13■■□□□ 1.13
NCAPD3-210ENST00000533155 JDP2Q8WYK2 163 aa22.13■■□□□ 1.13
NCAPD3-210ENST00000533155 TAF1P21675 1872 aa22.13■■□□□ 1.13
NCAPD3-210ENST00000533155 VAMP4O75379 141 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 GRAPQ13588 217 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 TMC4Q7Z404 712 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 ZBTB38Q8NAP3 1195 aaPredicted RBP22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 SMC1BQ8NDV3 1235 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 MAP3K2Q9Y2U5 619 aa22.12■■□□□ 1.13
NCAPD3-210ENST00000533155 IRS4O14654 1257 aaPredicted RBP22.11■■□□□ 1.13
NCAPD3-210ENST00000533155 DDNO94850 711 aaPredicted RBP22.11■■□□□ 1.13
NCAPD3-210ENST00000533155 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
NCAPD3-210ENST00000533155 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
NCAPD3-210ENST00000533155 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
NCAPD3-210ENST00000533155 APLP1P51693 650 aa22.1■■□□□ 1.13
NCAPD3-210ENST00000533155 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
NCAPD3-210ENST00000533155 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms