RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CLIP2Q9UDT6 1046 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 RANBP1P43487 201 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 FKBP4Q02790 459 aaKnown RBP eCLIP8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 HS1BP3Q53T59 392 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 IQCEQ6IPM2 695 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 HIP1O00291 1037 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 ZNF500O60304 480 aaPredicted RBP8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 POTEDQ86YR6 584 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 TANGO6Q9C0B7 1094 aa8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-210ENST00000533089 POTEB2H3BUK9 544 aa8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 SNW1Q13573 536 aaKnown RBP8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 CCDC6Q16204 474 aa8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 FILIP1LQ4L180 1135 aa8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 SULT6B1Q6IMI4 303 aa8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.12
TGFBR3-210ENST00000533089 TMEM2Q9UHN6 1383 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 KCNA6P17658 529 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 ZNF76P36508 570 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 TWISTNBQ3B726 338 aaPredicted RBP8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 NEK11Q8NG66 645 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 MORC4Q8TE76 937 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC85AQ96PX6 553 aaPredicted RBP8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC196A0A1B0GTZ2 297 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 ADAMTS2O95450 1211 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 ARMC9Q7Z3E5 817 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 MYO5CQ9NQX4 1742 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 GNAI2P04899 355 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 SLC4A2P04920 1241 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 MCM3P25205 808 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 PSMD2Q13200 908 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 TTC37Q6PGP7 1564 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 NSD2O96028 1365 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 KINO60870 393 aaKnown RBP8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 ZSCAN23Q3MJ62 389 aa8.02□□□□□ -1.13
TGFBR3-210ENST00000533089 NSD3Q9BZ95 1437 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 STK38Q15208 465 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 PUS7Q96PZ0 661 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 TMOD2Q9NZR1 351 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 TRIM4Q9C037 500 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 TTC12Q9H892 705 aaPredicted RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 RBM27Q9P2N5 1060 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 PHACTR2O75167 634 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 SLU7O95391 586 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 USP5P45974 858 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC92Q53HC0 331 aaPredicted RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 DNAI2Q9GZS0 605 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 SAMD9LQ8IVG5 1584 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 SMTNL1A8MU46 457 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 LMNTD2Q8IXW0 634 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 TRIM22Q8IYM9 498 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC148Q8NFR7 591 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 NGLY1Q96IV0 654 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 SEPT11Q9NVA2 429 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 SKAP1Q86WV1 359 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 ATRIPQ8WXE1 791 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 ZSWIM4Q9H7M6 989 aa8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 NOL7Q9UMY1 257 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-210ENST00000533089 EXOSC9Q06265 439 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 DNAJC21Q5F1R6 531 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 ZNF396Q96N95 335 aaPredicted RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 TTC21AQ8NDW8 1320 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 PCK1P35558 622 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 SPECC1LQ69YQ0 1117 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 TCP11L2Q8N4U5 519 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 PRPF38AQ8NAV1 312 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC171Q6TFL3 1326 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 DYTNA2CJ06 578 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 ZSCAN12O43309 604 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 SSFA2P28290 1259 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 NAP1L3Q99457 506 aaPredicted RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC113Q9H0I3 377 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 ZNF219Q9P2Y4 722 aaPredicted RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 KDM5DQ9BY66 1539 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 ARHGEF12Q9NZN5 1544 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 BTBD11A6QL63 1104 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 MAP7D1Q3KQU3 841 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 CTNNBL1Q8WYA6 563 aaPredicted RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 N4BP2L2Q92802 583 aaPredicted RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 SFPQP23246 707 aaKnown RBP eCLIP8□□□□□ -1.132e-6■■□□□ 13.1
TGFBR3-210ENST00000533089 IGHMBP2P38935 993 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 NEK4P51957 841 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 SMC1AQ14683 1233 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 RRS1Q15050 365 aaKnown RBP8□□□□□ -1.13
TGFBR3-210ENST00000533089 ZNF365Q70YC5 407 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 LRP2BPQ9P2M1 347 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 PRAG1Q86YV5 1406 aa8□□□□□ -1.13
TGFBR3-210ENST00000533089 LMTK3Q96Q04 1460 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ZKSCAN8Q15776 578 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 KIF4BQ2VIQ3 1234 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms