RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 TRIM28Q13263 835 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 ERFEQ4G0M1 354 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
TRAF3IP2-212ENST00000532708 JARID2Q92833 1246 aaPredicted RBP15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 ST5P78524 1137 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 BEND3Q5T5X7 828 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 C10orf71Q711Q0 1435 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 FAM89AQ96GI7 184 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 TNNQ9UQP3 1299 aa15.15■□□□□ 0.02
TRAF3IP2-212ENST00000532708 LINS1Q8NG48 757 aa15.14■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 WWC3Q9ULE0 1092 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 CHRNA5P30532 468 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 SH3TC1Q8TE82 1336 aa15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 GCKRQ14397 625 aa15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP2-212ENST00000532708 TRIM27P14373 513 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 DPEP1P16444 411 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ATF7IPQ6VMQ6 1270 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ARHGAP45Q92619 1136 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
TRAF3IP2-212ENST00000532708 PLIN1O60240 522 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 PDE6BP35913 854 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 TGFB2P61812 414 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 UTRNP46939 3433 aa15.1■□□□□ 0.01
TRAF3IP2-212ENST00000532708 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 IRS4O14654 1257 aaPredicted RBP15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 KCNA3P22001 575 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 SLC10A5Q5PT55 438 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 H0YIN7 160 aa15.09■□□□□ 0.01
TRAF3IP2-212ENST00000532708 TNRC6CQ9HCJ0 1690 aaKnown RBP15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 H7C1W4 665 aa15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 ALDH1L1O75891 902 aa15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 NLRP3Q96P20 1036 aa15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0
TRAF3IP2-212ENST00000532708 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 ABCC4O15439 1325 aa15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 GRM8O00222 908 aa15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 SRGNP10124 158 aa15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
TRAF3IP2-212ENST00000532708 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
TRAF3IP2-212ENST00000532708 NBPF7P0C2Y1 421 aaPredicted RBP15.06■□□□□ 0
TRAF3IP2-212ENST00000532708 RLBP1P12271 317 aa15.06■□□□□ 0
TRAF3IP2-212ENST00000532708 CASP7P55210 303 aa15.06■□□□□ 0
TRAF3IP2-212ENST00000532708 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
TRAF3IP2-212ENST00000532708 INTS3Q68E01 1043 aaKnown RBP15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 TMEM57Q8N5G2 664 aa15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 USP44Q9H0E7 712 aa15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 CDHR2Q9BYE9 1310 aa15.05■□□□□ 0
TRAF3IP2-212ENST00000532708 CRY2Q49AN0 593 aa15.05■□□□□ -0
TRAF3IP2-212ENST00000532708 PANK1Q8TE04 598 aa15.05■□□□□ -0
TRAF3IP2-212ENST00000532708 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
TRAF3IP2-212ENST00000532708 PIM2Q9P1W9 311 aa15.05■□□□□ -0
TRAF3IP2-212ENST00000532708 PDE8AO60658 829 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 MASTLQ96GX5 879 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 PDZRN3Q9UPQ7 1066 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 RIC1Q4ADV7 1423 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 LAMB2P55268 1798 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 NPR1P16066 1061 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 BCS1LQ9Y276 419 aa15.04■□□□□ -0
TRAF3IP2-212ENST00000532708 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 C20orf194Q5TEA3 1177 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 STYK1Q6J9G0 422 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 TTLL6Q8N841 843 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 SUCLG2Q96I99 432 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 TAF1P21675 1872 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 BRCA1P38398 1863 aaKnown RBP15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 UTYO14607 1347 aa15.02■□□□□ -0
TRAF3IP2-212ENST00000532708 DLEC1Q9Y238 1755 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms