RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 ANKRD36CQ5JPF3 1778 aa16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 FMR1Q06787 632 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 MCM10Q7L590 875 aa16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 TNRC18O15417 2968 aaPredicted RBP16.9■□□□□ 0.3
AP004550.1-201ENST00000532652 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
AP004550.1-201ENST00000532652 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
AP004550.1-201ENST00000532652 LMOD1P29536 600 aaPredicted RBP16.88■□□□□ 0.29
AP004550.1-201ENST00000532652 CRY2Q49AN0 593 aa16.88■□□□□ 0.29
AP004550.1-201ENST00000532652 PAXIP1Q6ZW49 1069 aaPredicted RBP16.88■□□□□ 0.29
AP004550.1-201ENST00000532652 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
AP004550.1-201ENST00000532652 CAPNS2Q96L46 248 aa16.88■□□□□ 0.29
AP004550.1-201ENST00000532652 EPS15P42566 896 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 SCNN1DP51172 638 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 GRM1Q13255 1194 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
AP004550.1-201ENST00000532652 ECE1P42892 770 aa16.86■□□□□ 0.29
AP004550.1-201ENST00000532652 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
AP004550.1-201ENST00000532652 BEGAINQ9BUH8 593 aa16.86■□□□□ 0.29
AP004550.1-201ENST00000532652 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
AP004550.1-201ENST00000532652 CCDC85CA6NKD9 419 aa16.85■□□□□ 0.29
AP004550.1-201ENST00000532652 TRAF5O00463 557 aa16.85■□□□□ 0.29
AP004550.1-201ENST00000532652 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
AP004550.1-201ENST00000532652 CST9Q5W186 159 aa16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 USP50Q70EL3 339 aaPredicted RBP16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 NGEFQ8N5V2 710 aa16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 RIC1Q4ADV7 1423 aa16.84■□□□□ 0.29
AP004550.1-201ENST00000532652 HOXA10P31260 410 aaPredicted RBP16.83■□□□□ 0.28
AP004550.1-201ENST00000532652 MLLT1Q03111 559 aaPredicted RBP16.83■□□□□ 0.28
AP004550.1-201ENST00000532652 TSKSQ9UJT2 592 aa16.83■□□□□ 0.28
AP004550.1-201ENST00000532652 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
AP004550.1-201ENST00000532652 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 RGS19P49795 217 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 TLL2Q9Y6L7 1015 aa16.82■□□□□ 0.28
AP004550.1-201ENST00000532652 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 UBN2Q6ZU65 1347 aa16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 AOC2O75106 756 aa16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 GPTP24298 496 aa16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
AP004550.1-201ENST00000532652 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
AP004550.1-201ENST00000532652 MAP2K2P36507 400 aa16.8■□□□□ 0.28
AP004550.1-201ENST00000532652 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
AP004550.1-201ENST00000532652 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
AP004550.1-201ENST00000532652 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
AP004550.1-201ENST00000532652 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 SUSD4Q5VX71 490 aa16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 KIF6Q6ZMV9 814 aa16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
AP004550.1-201ENST00000532652 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
AP004550.1-201ENST00000532652 AOC3Q16853 763 aa16.78■□□□□ 0.28
AP004550.1-201ENST00000532652 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
AP004550.1-201ENST00000532652 SAPCD2Q86UD0 394 aa16.78■□□□□ 0.28
AP004550.1-201ENST00000532652 ZBTB3Q9H5J0 574 aa16.78■□□□□ 0.28
AP004550.1-201ENST00000532652 NTSR2O95665 410 aa16.77■□□□□ 0.28
AP004550.1-201ENST00000532652 MYL6BP14649 208 aa16.77■□□□□ 0.28
AP004550.1-201ENST00000532652 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 CXCL9Q07325 125 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 CFAP44Q96MT7 982 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 GLIS2Q9BZE0 524 aaPredicted RBP16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 SCN9AQ15858 1988 aa16.76■□□□□ 0.27
AP004550.1-201ENST00000532652 CA12O43570 354 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 PSME4Q14997 1843 aa16.75■□□□□ 0.27
AP004550.1-201ENST00000532652 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 PPP1R42Q7Z4L9 355 aa16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 HHIPL1Q96JK4 782 aa16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
AP004550.1-201ENST00000532652 ABCC4O15439 1325 aa16.73■□□□□ 0.27
AP004550.1-201ENST00000532652 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
AP004550.1-201ENST00000532652 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
AP004550.1-201ENST00000532652 PGAP2Q9UHJ9 254 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms