RNA–Protein interactions for RNA: ENST00000532260.1

NDUFV1-222, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, human

TSL 4

Gene NDUFV1, Length 574 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDUFV1-222	ENST00000532260	CCDC30	Q5VVM6	783 aa		30.06	■■■□□ 2.4
NDUFV1-222	ENST00000532260	C7orf43	Q8WVR3	580 aa		30.06	■■■□□ 2.4
NDUFV1-222	ENST00000532260	TWISTNB	Q3B726	338 aa	Predicted RBP	30.05	■■■□□ 2.4
NDUFV1-222	ENST00000532260	CRY2	Q49AN0	593 aa		30.05	■■■□□ 2.4
NDUFV1-222	ENST00000532260	SLX4	Q8IY92	1834 aa		30.04	■■■□□ 2.4
NDUFV1-222	ENST00000532260	SLC10A5	Q5PT55	438 aa		30.04	■■■□□ 2.4
NDUFV1-222	ENST00000532260	ISCA1	Q9BUE6	129 aa		30.04	■■■□□ 2.4
NDUFV1-222	ENST00000532260	RNF181	Q9P0P0	153 aa		30.04	■■■□□ 2.4
NDUFV1-222	ENST00000532260	ATP5J2-PTCD1	G3V325	749 aa		30.03	■■■□□ 2.4
NDUFV1-222	ENST00000532260	TNRC6C	Q9HCJ0	1690 aa	Known RBP	30.02	■■■□□ 2.4
NDUFV1-222	ENST00000532260	OLFM4	Q6UX06	510 aa		30.02	■■■□□ 2.4
NDUFV1-222	ENST00000532260	EXOSC9	Q06265	439 aa	Known RBP	30	■■■□□ 2.39
NDUFV1-222	ENST00000532260	RIC3	Q7Z5B4	369 aa		30	■■■□□ 2.39
NDUFV1-222	ENST00000532260	GPBP1L1	Q9HC44	474 aa	Predicted RBP	30	■■■□□ 2.39
NDUFV1-222	ENST00000532260	TRMT112	Q9UI30	125 aa	Known RBP	30	■■■□□ 2.39
NDUFV1-222	ENST00000532260	RIC1	Q4ADV7	1423 aa		29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	CCER2	I3L3R5	266 aa		29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	HCLS1	P14317	486 aa	Predicted RBP	29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	LMNB1	P20700	586 aa		29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	HOXA10	P31260	410 aa	Predicted RBP	29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	GOLGA2	Q08379	1002 aa		29.99	■■■□□ 2.39
NDUFV1-222	ENST00000532260	ZNF521	Q96K83	1311 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	VAMP4	O75379	141 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	ALDH1B1	P30837	517 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	G2E3	Q7L622	706 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	NLRP3	Q96P20	1036 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	CHMP4A	Q9BY43	222 aa		29.98	■■■□□ 2.39
NDUFV1-222	ENST00000532260	TRIM28	Q13263	835 aa	Known RBP	29.96	■■■□□ 2.39
NDUFV1-222	ENST00000532260	RPGR	Q92834	1020 aa	Known RBP	29.96	■■■□□ 2.39
NDUFV1-222	ENST00000532260	SBF1	O95248	1867 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	SLC4A2	P04920	1241 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	SLC51A	Q86UW1	340 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	FAM89A	Q96GI7	184 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	MYD88	Q99836	296 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	STK31	Q9BXU1	1019 aa		29.95	■■■□□ 2.39
NDUFV1-222	ENST00000532260	RNF123	Q5XPI4	1314 aa		29.95	■■■□□ 2.38
NDUFV1-222	ENST00000532260	SH3TC1	Q8TE82	1336 aa		29.95	■■■□□ 2.38
NDUFV1-222	ENST00000532260	ANKRD36C	Q5JPF3	1778 aa		29.93	■■■□□ 2.38
NDUFV1-222	ENST00000532260	SOGA3	Q5TF21	947 aa		29.93	■■■□□ 2.38
NDUFV1-222	ENST00000532260	RBM17	Q96I25	401 aa	Known RBP	29.93	■■■□□ 2.38
NDUFV1-222	ENST00000532260	CRAMP1	Q96RY5	1269 aa		29.93	■■■□□ 2.38
NDUFV1-222	ENST00000532260	TAOK3	Q9H2K8	898 aa		29.93	■■■□□ 2.38
NDUFV1-222	ENST00000532260	CCDC93	Q567U6	631 aa		29.92	■■■□□ 2.38
NDUFV1-222	ENST00000532260	RTL5	Q5HYW3	569 aa	Predicted RBP	29.92	■■■□□ 2.38
NDUFV1-222	ENST00000532260	MYH16	Q9H6N6	1097 aa		29.92	■■■□□ 2.38
NDUFV1-222	ENST00000532260	METTL22	Q9BUU2	404 aa	Predicted RBP	29.91	■■■□□ 2.38
NDUFV1-222	ENST00000532260	MAP3K2	Q9Y2U5	619 aa		29.91	■■■□□ 2.38
NDUFV1-222	ENST00000532260	LTBP3	Q9NS15	1303 aa		29.91	■■■□□ 2.38
NDUFV1-222	ENST00000532260	CACNA1S	Q13698	1873 aa		29.91	■■■□□ 2.38
NDUFV1-222	ENST00000532260	PI4KAP2	A4QPH2	592 aa		29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	DDX58	O95786	925 aa	Known RBP	29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	KSR2	Q6VAB6	950 aa		29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	PI4KAP1	Q8N8J0	262 aa		29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	NMRK2	Q9NPI5	230 aa		29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	ARFGEF2	Q9Y6D5	1785 aa		29.9	■■■□□ 2.38
NDUFV1-222	ENST00000532260	KIF3C	O14782	793 aa		29.89	■■■□□ 2.38
NDUFV1-222	ENST00000532260	C1QTNF8	P60827	252 aa		29.89	■■■□□ 2.38
NDUFV1-222	ENST00000532260	DIEXF	Q68CQ4	756 aa	Known RBP	29.89	■■■□□ 2.38
NDUFV1-222	ENST00000532260	FER1L6	Q2WGJ9	1857 aa		29.89	■■■□□ 2.37
NDUFV1-222	ENST00000532260	MIER1	Q8N108	512 aa		29.88	■■■□□ 2.37
NDUFV1-222	ENST00000532260	JARID2	Q92833	1246 aa	Predicted RBP	29.88	■■■□□ 2.37
NDUFV1-222	ENST00000532260	RTKN2	Q8IZC4	609 aa		29.87	■■■□□ 2.37
NDUFV1-222	ENST00000532260	IGKV5-2	P06315	115 aa		29.86	■■■□□ 2.37
NDUFV1-222	ENST00000532260	FKBP4	Q02790	459 aa	Known RBP eCLIP	29.86	■■■□□ 2.37
NDUFV1-222	ENST00000532260	ZNF277	Q9NRM2	450 aa	Predicted RBP	29.86	■■■□□ 2.37
NDUFV1-222	ENST00000532260	ABCC4	O15439	1325 aa		29.86	■■■□□ 2.37
NDUFV1-222	ENST00000532260	IRS4	O14654	1257 aa	Predicted RBP	29.85	■■■□□ 2.37
NDUFV1-222	ENST00000532260	FLII	Q13045	1269 aa		29.85	■■■□□ 2.37
NDUFV1-222	ENST00000532260	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29.85	■■■□□ 2.37
NDUFV1-222	ENST00000532260	CCDC191	Q8NCU4	936 aa		29.85	■■■□□ 2.37
NDUFV1-222	ENST00000532260	PPEF1	O14829	653 aa	Predicted RBP	29.84	■■■□□ 2.37
NDUFV1-222	ENST00000532260	CWC25	Q9NXE8	425 aa	Predicted RBP	29.84	■■■□□ 2.37
NDUFV1-222	ENST00000532260	SNED1	Q8TER0	1413 aa		29.84	■■■□□ 2.37
NDUFV1-222	ENST00000532260	ZC3H4	Q9UPT8	1303 aa	Known RBP	29.83	■■■□□ 2.37
NDUFV1-222	ENST00000532260	CCDC88A	Q3V6T2	1871 aa		29.82	■■■□□ 2.37
NDUFV1-222	ENST00000532260	SF3B3	Q15393	1217 aa	Known RBP	29.82	■■■□□ 2.36
NDUFV1-222	ENST00000532260	CC2D2B	Q6DHV5	1058 aa		29.82	■■■□□ 2.36
NDUFV1-222	ENST00000532260	RRAGC	Q9HB90	399 aa		29.82	■■■□□ 2.36
NDUFV1-222	ENST00000532260	GLTPD2	A6NH11	291 aa		29.81	■■■□□ 2.36
NDUFV1-222	ENST00000532260	PCCA	P05165	728 aa	Predicted RBP	29.81	■■■□□ 2.36
NDUFV1-222	ENST00000532260	DDX46	Q7L014	1031 aa	Known RBP	29.81	■■■□□ 2.36
NDUFV1-222	ENST00000532260	CDCA7L	Q96GN5	454 aa		29.81	■■■□□ 2.36
NDUFV1-222	ENST00000532260	KDM2B	Q8NHM5	1336 aa		29.8	■■■□□ 2.36
NDUFV1-222	ENST00000532260	SLFN5	Q08AF3	891 aa		29.8	■■■□□ 2.36
NDUFV1-222	ENST00000532260	CWF19L2	Q2TBE0	894 aa	Known RBP	29.8	■■■□□ 2.36
NDUFV1-222	ENST00000532260	ATP6V0A2	Q9Y487	856 aa		29.8	■■■□□ 2.36
NDUFV1-222	ENST00000532260	BBOX1	O75936	387 aa		29.79	■■■□□ 2.36
NDUFV1-222	ENST00000532260	FKBP5	Q13451	457 aa	Predicted RBP	29.79	■■■□□ 2.36
NDUFV1-222	ENST00000532260	PSMD1	Q99460	953 aa		29.79	■■■□□ 2.36
NDUFV1-222	ENST00000532260	LAMB2	P55268	1798 aa		29.78	■■■□□ 2.36
NDUFV1-222	ENST00000532260		E9PSI1	815 aa		29.78	■■■□□ 2.36
NDUFV1-222	ENST00000532260	GRAP	Q13588	217 aa		29.78	■■■□□ 2.36
NDUFV1-222	ENST00000532260	GRAPL	Q8TC17	118 aa	Predicted RBP	29.78	■■■□□ 2.36
NDUFV1-222	ENST00000532260	NEURL1B	A8MQ27	555 aa		29.77	■■■□□ 2.36
NDUFV1-222	ENST00000532260	DDX60	Q8IY21	1712 aa	Known RBP	29.76	■■■□□ 2.36
NDUFV1-222	ENST00000532260	IARS	P41252	1262 aa	Known RBP	29.76	■■■□□ 2.35
NDUFV1-222	ENST00000532260	NEXN	Q0ZGT2	675 aa		29.76	■■■□□ 2.35
NDUFV1-222	ENST00000532260	SP8	Q8IXZ3	490 aa		29.76	■■■□□ 2.35
NDUFV1-222	ENST00000532260	DNAAF4	Q8WXU2	420 aa		29.76	■■■□□ 2.35
NDUFV1-222	ENST00000532260	CELF1	Q92879	486 aa	Known RBP	29.76	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms