RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF790Q6PG37 636 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 COL23A1Q86Y22 540 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 RUNDC1Q96C34 613 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 PPP1R1BQ9UD71 204 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 ADAMTS7Q9UKP4 1686 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 SCN11AQ9UI33 1791 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 SSFA2P28290 1259 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 TMPOP42166 694 aaKnown RBP7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 TAF7Q15545 349 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 DNAJC10Q8IXB1 793 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 GLMNQ92990 594 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 RTCBQ9Y3I0 505 aaKnown RBP7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 IVNS1ABPQ9Y6Y0 642 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 C5P01031 1676 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 LRP5O75197 1615 aa7.56□□□□□ -1.2
HMGB1P42-201ENST00000532126 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 RPS6KA4O75676 772 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 CYP19A1P11511 503 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 POLD1P28340 1107 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 CRKLP46109 303 aaKnown RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 ATN1P54259 1190 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 TRAPPC3LQ5T215 181 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 IER5LQ5T953 404 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 SMIM5Q71RC9 77 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 AMIGO3Q86WK7 504 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 FAM177A1Q8N128 213 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 ZNF496Q96IT1 587 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 THUMPD2Q9BTF0 503 aaKnown RBP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 CASZ1Q86V15 1759 aa7.55□□□□□ -1.2
HMGB1P42-201ENST00000532126 KCPQ6ZWJ8 1503 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 KCNQ3O43525 872 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 STARD3NLO95772 234 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 RFC4P35249 363 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 MSL1Q68DK7 614 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 REPIN1Q9BWE0 567 aaKnown RBP7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 TEX13AQ9BXU3 409 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 CCDC87Q9NVE4 849 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 MIS18AQ9NYP9 233 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 HEG1Q9ULI3 1381 aa7.54□□□□□ -1.2
HMGB1P42-201ENST00000532126 APAF1O14727 1248 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 SNRPA1P09661 255 aaKnown RBP7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 PLCG2P16885 1265 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 RFC5P40937 340 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 BEGAINQ9BUH8 593 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 SNRKQ9NRH2 765 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 ZNF831Q5JPB2 1677 aa7.53□□□□□ -1.2
HMGB1P42-201ENST00000532126 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 CLCN6P51797 869 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 B4GALNT3Q6L9W6 998 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 TMEM92Q6UXU6 159 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 NLGN1Q8N2Q7 840 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 CHMP4AQ9BY43 222 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 GDPD2Q9HCC8 539 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 TSPYL4Q9UJ04 414 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 ZBTB1Q9Y2K1 713 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 TAF1LQ8IZX4 1826 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 QSER1Q2KHR3 1735 aa7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P42-201ENST00000532126 PRAMEF22A3QJZ6 481 aa7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 ZPR1O75312 459 aa7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 ERCC3P19447 782 aa7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 CLK2P49760 499 aaKnown RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 BABAM1Q9NWV8 329 aa7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 LAS1LQ9Y4W2 734 aaKnown RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 USP16Q9Y5T5 823 aa7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 CICQ96RK0 1608 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 USP42Q9H9J4 1324 aaKnown RBP7.51□□□□□ -1.21
HMGB1P42-201ENST00000532126 COL5A3P25940 1745 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 TJP1Q07157 1748 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 A0A087WZG4 1122 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 ATMINO43313 823 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 GIGYF1O75420 1035 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 A1BGP04217 495 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 MMP10P09238 476 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 GYS1P13807 737 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 IL6STP40189 918 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 ABL2P42684 1182 aa7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 EIF5P55010 431 aaKnown RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 EIF4A1P60842 406 aaKnown RBP7.5□□□□□ -1.21
HMGB1P42-201ENST00000532126 CALD1Q05682 793 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms