RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FLIIQ13045 1269 aa15.96■□□□□ 0.15
COPB1-208ENST00000532088 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
COPB1-208ENST00000532088 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
COPB1-208ENST00000532088 DDX58O95786 925 aaKnown RBP15.95■□□□□ 0.14
COPB1-208ENST00000532088 MYL6BP14649 208 aa15.95■□□□□ 0.14
COPB1-208ENST00000532088 ZNF827Q17R98 1081 aa15.95■□□□□ 0.14
COPB1-208ENST00000532088 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
COPB1-208ENST00000532088 TRAPPC3LQ5T215 181 aa15.94■□□□□ 0.14
COPB1-208ENST00000532088 COPS6Q7L5N1 327 aa15.94■□□□□ 0.14
COPB1-208ENST00000532088 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
COPB1-208ENST00000532088 TFCP2L1Q9NZI6 479 aa15.94■□□□□ 0.14
COPB1-208ENST00000532088 SOCS7O14512 581 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 TCERG1O14776 1098 aaKnown RBP15.93■□□□□ 0.14
COPB1-208ENST00000532088 BCAR3O75815 825 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 ANXA1P04083 346 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.93■□□□□ 0.14
COPB1-208ENST00000532088 PLBD2Q8NHP8 589 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 XAGE3Q8WTP9 111 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 BCL2L13Q9BXK5 485 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
COPB1-208ENST00000532088 MAP3K15Q6ZN16 1313 aa15.93■□□□□ 0.14
COPB1-208ENST00000532088 TUBGCP6Q96RT7 1819 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
COPB1-208ENST00000532088 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
COPB1-208ENST00000532088 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 G2E3Q7L622 706 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 DZIP3Q86Y13 1208 aaKnown RBP15.92■□□□□ 0.14
COPB1-208ENST00000532088 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
COPB1-208ENST00000532088 API5Q9BZZ5 524 aaKnown RBP15.92■□□□□ 0.14
COPB1-208ENST00000532088 CRISPLD2Q9H0B8 497 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 BCORQ6W2J9 1755 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
COPB1-208ENST00000532088 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
COPB1-208ENST00000532088 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
COPB1-208ENST00000532088 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 KSR2Q6VAB6 950 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 NOB1Q9ULX3 412 aaKnown RBP15.91■□□□□ 0.14
COPB1-208ENST00000532088 PNPLA7Q6ZV29 1317 aa15.91■□□□□ 0.14
COPB1-208ENST00000532088 USP42Q9H9J4 1324 aaKnown RBP15.91■□□□□ 0.14
COPB1-208ENST00000532088 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 MS4A1P11836 297 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 PDE4AP27815 886 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 RFC4P35249 363 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
COPB1-208ENST00000532088 ADCY9O60503 1353 aa15.89■□□□□ 0.13
COPB1-208ENST00000532088 ZPR1O75312 459 aa15.89■□□□□ 0.13
COPB1-208ENST00000532088 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
COPB1-208ENST00000532088 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
COPB1-208ENST00000532088 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
COPB1-208ENST00000532088 ZNF330Q9Y3S2 320 aaPredicted RBP15.89■□□□□ 0.13
COPB1-208ENST00000532088 ATP10DQ9P241 1426 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 PI4KAP2A4QPH2 592 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 PHF14O94880 888 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
COPB1-208ENST00000532088 PI4KAP1Q8N8J0 262 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 DNAAF4Q8WXU2 420 aa15.88■□□□□ 0.13
COPB1-208ENST00000532088 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
COPB1-208ENST00000532088 TRIM27P14373 513 aa15.87■□□□□ 0.13
COPB1-208ENST00000532088 RRP1P56182 461 aaKnown RBP15.87■□□□□ 0.13
COPB1-208ENST00000532088 METTL22Q9BUU2 404 aaPredicted RBP15.87■□□□□ 0.13
COPB1-208ENST00000532088 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
COPB1-208ENST00000532088 ABCC4O15439 1325 aa15.87■□□□□ 0.13
COPB1-208ENST00000532088 N4BP2Q86UW6 1770 aaPredicted RBP15.86■□□□□ 0.13
COPB1-208ENST00000532088 TRIM28Q13263 835 aaKnown RBP15.86■□□□□ 0.13
COPB1-208ENST00000532088 PDE3AQ14432 1141 aa15.86■□□□□ 0.13
COPB1-208ENST00000532088 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
COPB1-208ENST00000532088 FRAT1Q92837 279 aaPredicted RBP15.86■□□□□ 0.13
COPB1-208ENST00000532088 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
COPB1-208ENST00000532088 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
COPB1-208ENST00000532088 GYS1P13807 737 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
COPB1-208ENST00000532088 NUP98P52948 1817 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
COPB1-208ENST00000532088 HLFQ16534 295 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 C3orf67Q6ZVT6 689 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 DZIP1LQ8IYY4 767 aaKnown RBP15.84■□□□□ 0.13
COPB1-208ENST00000532088 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 LINS1Q8NG48 757 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 ARXQ96QS3 562 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 ISCA1Q9BUE6 129 aa15.84■□□□□ 0.13
COPB1-208ENST00000532088 SRP68Q9UHB9 627 aaKnown RBP15.84■□□□□ 0.13
COPB1-208ENST00000532088 ALDH1L1O75891 902 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms