RNA–Protein interactions for RNA: ENST00000532083.1

NLRP3-208, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 2

Gene NLRP3, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-208ENST00000532083 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
NLRP3-208ENST00000532083 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
NLRP3-208ENST00000532083 POTECB2RU33 542 aa16.56■□□□□ 0.24
NLRP3-208ENST00000532083 VEGFAP15692 232 aaPredicted RBP16.56■□□□□ 0.24
NLRP3-208ENST00000532083 PDIA6Q15084 440 aa16.56■□□□□ 0.24
NLRP3-208ENST00000532083 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
NLRP3-208ENST00000532083 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
NLRP3-208ENST00000532083 FSTL1Q12841 308 aa16.55■□□□□ 0.24
NLRP3-208ENST00000532083 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
NLRP3-208ENST00000532083 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
NLRP3-208ENST00000532083 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
NLRP3-208ENST00000532083 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
NLRP3-208ENST00000532083 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
NLRP3-208ENST00000532083 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
NLRP3-208ENST00000532083 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
NLRP3-208ENST00000532083 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
NLRP3-208ENST00000532083 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
NLRP3-208ENST00000532083 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
NLRP3-208ENST00000532083 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
NLRP3-208ENST00000532083 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
NLRP3-208ENST00000532083 GIGYF2Q6Y7W6 1299 aaKnown RBP16.53■□□□□ 0.24
NLRP3-208ENST00000532083 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
NLRP3-208ENST00000532083 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
NLRP3-208ENST00000532083 ZNF428Q96B54 188 aa16.53■□□□□ 0.24
NLRP3-208ENST00000532083 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
NLRP3-208ENST00000532083 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.24
NLRP3-208ENST00000532083 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
NLRP3-208ENST00000532083 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
NLRP3-208ENST00000532083 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
NLRP3-208ENST00000532083 NTSR2O95665 410 aa16.51■□□□□ 0.23
NLRP3-208ENST00000532083 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
NLRP3-208ENST00000532083 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
NLRP3-208ENST00000532083 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
NLRP3-208ENST00000532083 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
NLRP3-208ENST00000532083 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
NLRP3-208ENST00000532083 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
NLRP3-208ENST00000532083 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
NLRP3-208ENST00000532083 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
NLRP3-208ENST00000532083 POTEIP0CG38 1075 aa16.49■□□□□ 0.23
NLRP3-208ENST00000532083 POTEJP0CG39 1038 aa16.49■□□□□ 0.23
NLRP3-208ENST00000532083 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
NLRP3-208ENST00000532083 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
NLRP3-208ENST00000532083 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
NLRP3-208ENST00000532083 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
NLRP3-208ENST00000532083 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
NLRP3-208ENST00000532083 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
NLRP3-208ENST00000532083 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
NLRP3-208ENST00000532083 CHPF2Q9P2E5 772 aa16.48■□□□□ 0.23
NLRP3-208ENST00000532083 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
NLRP3-208ENST00000532083 IARSP41252 1262 aaKnown RBP16.47■□□□□ 0.23
NLRP3-208ENST00000532083 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
NLRP3-208ENST00000532083 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
NLRP3-208ENST00000532083 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
NLRP3-208ENST00000532083 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
NLRP3-208ENST00000532083 KLRG1Q96E93 195 aa16.46■□□□□ 0.23
NLRP3-208ENST00000532083 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
NLRP3-208ENST00000532083 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
NLRP3-208ENST00000532083 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
NLRP3-208ENST00000532083 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
NLRP3-208ENST00000532083 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
NLRP3-208ENST00000532083 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
NLRP3-208ENST00000532083 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
NLRP3-208ENST00000532083 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
NLRP3-208ENST00000532083 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
NLRP3-208ENST00000532083 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
NLRP3-208ENST00000532083 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
NLRP3-208ENST00000532083 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
NLRP3-208ENST00000532083 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
NLRP3-208ENST00000532083 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
NLRP3-208ENST00000532083 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
NLRP3-208ENST00000532083 PSMD1Q99460 953 aa16.44■□□□□ 0.22
NLRP3-208ENST00000532083 COL4A5P29400 1685 aa16.43■□□□□ 0.22
NLRP3-208ENST00000532083 ELL2O00472 640 aaPredicted RBP16.43■□□□□ 0.22
NLRP3-208ENST00000532083 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
NLRP3-208ENST00000532083 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
NLRP3-208ENST00000532083 TAF1DQ9H5J8 278 aaPredicted RBP16.43■□□□□ 0.22
NLRP3-208ENST00000532083 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
NLRP3-208ENST00000532083 TRMT112Q9UI30 125 aaKnown RBP16.43■□□□□ 0.22
NLRP3-208ENST00000532083 LAMB2P55268 1798 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 FZD9O00144 591 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 VAMP4O75379 141 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
NLRP3-208ENST00000532083 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
NLRP3-208ENST00000532083 ABCC4O15439 1325 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
NLRP3-208ENST00000532083 IQCA1LA6NCM1 817 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 STK31Q9BXU1 1019 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 TAF1P21675 1872 aa16.41■□□□□ 0.22
NLRP3-208ENST00000532083 SCN4AP35499 1836 aa16.4■□□□□ 0.22
NLRP3-208ENST00000532083 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
NLRP3-208ENST00000532083 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
NLRP3-208ENST00000532083 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
NLRP3-208ENST00000532083 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms