RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 C2CD5Q86YS7 1000 aa26.54■■□□□ 1.84
CCS-207ENST00000531990 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
CCS-207ENST00000531990 TRMT112Q9UI30 125 aaKnown RBP26.53■■□□□ 1.84
CCS-207ENST00000531990 ADCY9O60503 1353 aa26.53■■□□□ 1.84
CCS-207ENST00000531990 ERFEQ4G0M1 354 aa26.52■■□□□ 1.84
CCS-207ENST00000531990 SSH1Q8WYL5 1049 aa26.52■■□□□ 1.84
CCS-207ENST00000531990 PIM2Q9P1W9 311 aa26.52■■□□□ 1.84
CCS-207ENST00000531990 DLEC1Q9Y238 1755 aa26.52■■□□□ 1.84
CCS-207ENST00000531990 BRCA1P38398 1863 aaKnown RBP26.51■■□□□ 1.83
CCS-207ENST00000531990 MRPL50Q8N5N7 158 aaKnown RBP26.51■■□□□ 1.83
CCS-207ENST00000531990 SMC4Q9NTJ3 1288 aa26.51■■□□□ 1.83
CCS-207ENST00000531990 WWC3Q9ULE0 1092 aa26.51■■□□□ 1.83
CCS-207ENST00000531990 CCDC191Q8NCU4 936 aa26.5■■□□□ 1.83
CCS-207ENST00000531990 DNAAF4Q8WXU2 420 aa26.5■■□□□ 1.83
CCS-207ENST00000531990 SH3TC1Q8TE82 1336 aa26.49■■□□□ 1.83
CCS-207ENST00000531990 KCNA3P22001 575 aa26.49■■□□□ 1.83
CCS-207ENST00000531990 RIC1Q4ADV7 1423 aa26.48■■□□□ 1.83
CCS-207ENST00000531990 ABCC12Q96J65 1359 aa26.48■■□□□ 1.83
CCS-207ENST00000531990 DALRD3Q5D0E6 543 aaKnown RBP26.48■■□□□ 1.83
CCS-207ENST00000531990 BCL2L13Q9BXK5 485 aa26.48■■□□□ 1.83
CCS-207ENST00000531990 CWC25Q9NXE8 425 aaPredicted RBP26.48■■□□□ 1.83
CCS-207ENST00000531990 BCS1LQ9Y276 419 aa26.48■■□□□ 1.83
CCS-207ENST00000531990 COL11A2P13942 1736 aaPredicted RBP26.48■■□□□ 1.83
CCS-207ENST00000531990 ZNF622Q969S3 477 aaKnown RBP eCLIP26.47■■□□□ 1.837e-11■□□□□ 9.8
CCS-207ENST00000531990 PTPRCP08575 1304 aa26.46■■□□□ 1.83
CCS-207ENST00000531990 GRIN3BO60391 1043 aa26.46■■□□□ 1.83
CCS-207ENST00000531990 SLC10A5Q5PT55 438 aa26.46■■□□□ 1.83
CCS-207ENST00000531990 TNRC6CQ9HCJ0 1690 aaKnown RBP26.46■■□□□ 1.83
CCS-207ENST00000531990 KLRG2A4D1S0 409 aaPredicted RBP26.45■■□□□ 1.82
CCS-207ENST00000531990 SRGNP10124 158 aa26.45■■□□□ 1.82
CCS-207ENST00000531990 YBX3P16989 372 aaKnown RBP eCLIP26.45■■□□□ 1.82
CCS-207ENST00000531990 TTLL6Q8N841 843 aa26.45■■□□□ 1.82
CCS-207ENST00000531990 MASTLQ96GX5 879 aa26.45■■□□□ 1.82
CCS-207ENST00000531990 NLRP3Q96P20 1036 aa26.45■■□□□ 1.82
CCS-207ENST00000531990 F6X3S4 739 aa26.44■■□□□ 1.82
CCS-207ENST00000531990 IGKV5-2P06315 115 aa26.44■■□□□ 1.82
CCS-207ENST00000531990 NPR1P16066 1061 aa26.44■■□□□ 1.82
CCS-207ENST00000531990 RARSP54136 660 aaKnown RBP26.44■■□□□ 1.82
CCS-207ENST00000531990 STYK1Q6J9G0 422 aa26.44■■□□□ 1.82
CCS-207ENST00000531990 FAM89AQ96GI7 184 aa26.44■■□□□ 1.82
CCS-207ENST00000531990 HSP90B1P14625 803 aaKnown RBP26.43■■□□□ 1.82
CCS-207ENST00000531990 ZBTB38Q8NAP3 1195 aaPredicted RBP26.43■■□□□ 1.82
CCS-207ENST00000531990 LINS1Q8NG48 757 aa26.43■■□□□ 1.82
CCS-207ENST00000531990 CNKSR1Q969H4 720 aa26.43■■□□□ 1.82
CCS-207ENST00000531990 ARFGEF1Q9Y6D6 1849 aa26.43■■□□□ 1.82
CCS-207ENST00000531990 NEURL1BA8MQ27 555 aa26.42■■□□□ 1.82
CCS-207ENST00000531990 CWF19L2Q2TBE0 894 aaKnown RBP26.42■■□□□ 1.82
CCS-207ENST00000531990 RPGRQ92834 1020 aaKnown RBP26.42■■□□□ 1.82
CCS-207ENST00000531990 PCCAP05165 728 aaPredicted RBP26.41■■□□□ 1.82
CCS-207ENST00000531990 HCLS1P14317 486 aaPredicted RBP26.41■■□□□ 1.82
CCS-207ENST00000531990 BRPF1P55201 1214 aaPredicted RBP26.41■■□□□ 1.82
CCS-207ENST00000531990 RTL5Q5HYW3 569 aaPredicted RBP26.41■■□□□ 1.82
CCS-207ENST00000531990 SLC4A10Q6U841 1118 aa26.41■■□□□ 1.82
CCS-207ENST00000531990 SYNE4Q8N205 404 aa26.41■■□□□ 1.82
CCS-207ENST00000531990 CACNA1SQ13698 1873 aa26.4■■□□□ 1.82
CCS-207ENST00000531990 DDX60Q8IY21 1712 aaKnown RBP26.4■■□□□ 1.82
CCS-207ENST00000531990 CRY2Q49AN0 593 aa26.4■■□□□ 1.82
CCS-207ENST00000531990 LAMB2P55268 1798 aa26.4■■□□□ 1.82
CCS-207ENST00000531990 KIF16BQ96L93 1317 aa26.39■■□□□ 1.82
CCS-207ENST00000531990 IRS4O14654 1257 aaPredicted RBP26.39■■□□□ 1.82
CCS-207ENST00000531990 ALDH1B1P30837 517 aa26.39■■□□□ 1.82
CCS-207ENST00000531990 YTHDC1Q96MU7 727 aaKnown RBP26.39■■□□□ 1.82
CCS-207ENST00000531990 GCKRQ14397 625 aa26.38■■□□□ 1.81
CCS-207ENST00000531990 BEND3Q5T5X7 828 aa26.38■■□□□ 1.81
CCS-207ENST00000531990 RBM17Q96I25 401 aaKnown RBP26.38■■□□□ 1.81
CCS-207ENST00000531990 SRCIN1Q9C0H9 1055 aa26.37■■□□□ 1.81
CCS-207ENST00000531990 NOB1Q9ULX3 412 aaKnown RBP26.37■■□□□ 1.81
CCS-207ENST00000531990 API5Q9BZZ5 524 aaKnown RBP26.36■■□□□ 1.81
CCS-207ENST00000531990 CDHR2Q9BYE9 1310 aa26.36■■□□□ 1.81
CCS-207ENST00000531990 ALDH1L1O75891 902 aa26.35■■□□□ 1.81
CCS-207ENST00000531990 HOXA10P31260 410 aaPredicted RBP26.35■■□□□ 1.81
CCS-207ENST00000531990 PRPF40BQ6NWY9 871 aaKnown RBP26.35■■□□□ 1.81
CCS-207ENST00000531990 C3orf67Q6ZVT6 689 aa26.35■■□□□ 1.81
CCS-207ENST00000531990 JARID2Q92833 1246 aaPredicted RBP26.35■■□□□ 1.81
CCS-207ENST00000531990 CHD4Q14839 1912 aa26.34■■□□□ 1.81
CCS-207ENST00000531990 IPO8O15397 1037 aaKnown RBP26.34■■□□□ 1.81
CCS-207ENST00000531990 UBE3BQ7Z3V4 1068 aa26.34■■□□□ 1.81
CCS-207ENST00000531990 CRAMP1Q96RY5 1269 aa26.34■■□□□ 1.81
CCS-207ENST00000531990 SLX4Q8IY92 1834 aa26.34■■□□□ 1.81
CCS-207ENST00000531990 H7C1W4 665 aa26.33■■□□□ 1.81
CCS-207ENST00000531990 ARHGAP27Q6ZUM4 889 aa26.33■■□□□ 1.81
CCS-207ENST00000531990 DDX46Q7L014 1031 aaKnown RBP26.33■■□□□ 1.81
CCS-207ENST00000531990 PDE8AO60658 829 aa26.32■■□□□ 1.8
CCS-207ENST00000531990 BCAR3O75815 825 aa26.32■■□□□ 1.8
CCS-207ENST00000531990 ARHGAP45Q92619 1136 aa26.32■■□□□ 1.8
CCS-207ENST00000531990 C9orf78Q9NZ63 289 aaPredicted RBP26.32■■□□□ 1.8
CCS-207ENST00000531990 MYH3P11055 1940 aa26.31■■□□□ 1.8
CCS-207ENST00000531990 SF3B3Q15393 1217 aaKnown RBP26.31■■□□□ 1.8
CCS-207ENST00000531990 SOGA3Q5TF21 947 aa26.31■■□□□ 1.8
CCS-207ENST00000531990 FRAT1Q92837 279 aaPredicted RBP26.31■■□□□ 1.8
CCS-207ENST00000531990 ZNF219Q9P2Y4 722 aaPredicted RBP26.31■■□□□ 1.8
CCS-207ENST00000531990 C21orf2O43822 256 aa26.3■■□□□ 1.8
CCS-207ENST00000531990 GRM8O00222 908 aa26.29■■□□□ 1.8
CCS-207ENST00000531990 CCT4P50991 539 aaKnown RBP26.28■■□□□ 1.8
CCS-207ENST00000531990 CCDC152Q4G0S7 254 aa26.28■■□□□ 1.8
CCS-207ENST00000531990 ABCC4O15439 1325 aa26.28■■□□□ 1.8
CCS-207ENST00000531990 TMX4Q9H1E5 349 aaPredicted RBP26.27■■□□□ 1.8
CCS-207ENST00000531990 PPEF1O14829 653 aaPredicted RBP26.26■■□□□ 1.79
CCS-207ENST00000531990 CASP7P55210 303 aa26.26■■□□□ 1.79
CCS-207ENST00000531990 CTSWP56202 376 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms