RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 HSP90AB2PQ58FF8 381 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 POTEAQ6S8J7 498 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 SNIP1Q8TAD8 396 aaKnown RBP6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 IRF7Q92985 503 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 GPRASP2Q96D09 838 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 CFHR5Q9BXR6 569 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 SIRPGQ9P1W8 387 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 GGT7Q9UJ14 662 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 CHMP3Q9Y3E7 222 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 COL4A3BPQ9Y5P4 624 aa6.03□□□□□ -1.44
AC055878.1-201ENST00000531858 PPP1R12AO14974 1030 aaPredicted RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 SMPD1P17405 629 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 SCNN1DP51172 638 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 GDF10P55107 478 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 PSMA6P60900 246 aaKnown RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 ERVK-9P63128 1117 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 FOXK2Q01167 660 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 TNS4Q8IZW8 715 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 SRCIN1Q9C0H9 1055 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 TSPAN10Q9H1Z9 355 aaPredicted RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 SPC25Q9HBM1 224 aa6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 NXF1Q9UBU9 619 aaKnown RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 DMGDHQ9UI17 866 aaKnown RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 MRPL42Q9Y6G3 142 aaKnown RBP6.02□□□□□ -1.45
AC055878.1-201ENST00000531858 LOC102724159A0A0B4J2E5 919 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 A0A1W2PRU2 124 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 DNAJC6O75061 913 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 PWP2Q15269 919 aaKnown RBP6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 TAF1CQ15572 869 aaPredicted RBP6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 ESCO1Q5FWF5 840 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 PPARGC1BQ86YN6 1023 aaKnown RBP6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 ZNF511Q8NB15 262 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 FAM13BQ9NYF5 915 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 STRIP2Q9ULQ0 834 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 POLIQ9UNA4 740 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 MAP4K5Q9Y4K4 846 aa6.01□□□□□ -1.45
AC055878.1-201ENST00000531858 WNT7AO00755 349 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 EIF1AYO14602 144 aaKnown RBP6□□□□□ -1.45
AC055878.1-201ENST00000531858 HIRAP54198 1017 aaPredicted RBP6□□□□□ -1.45
AC055878.1-201ENST00000531858 MTFR1Q15390 333 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 TAF7LQ5H9L4 462 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 GORABQ5T7V8 394 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 SETDB2Q96T68 719 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 SLKQ9H2G2 1235 aaPredicted RBP6□□□□□ -1.45
AC055878.1-201ENST00000531858 C12orf49Q9H741 205 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 QTRT2Q9H974 415 aaKnown RBP6□□□□□ -1.45
AC055878.1-201ENST00000531858 PCDH12Q9NPG4 1184 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 TYW1Q9NV66 732 aaKnown RBP6□□□□□ -1.45
AC055878.1-201ENST00000531858 IFT57Q9NWB7 429 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 PCDHGB7Q9Y5F8 929 aa6□□□□□ -1.45
AC055878.1-201ENST00000531858 CPNE3O75131 537 aaKnown RBP5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 PDGFAP04085 211 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 PAK2Q13177 524 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 COL9A2Q14055 689 aaPredicted RBP5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 ARSHQ5FYA8 562 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 PTCRAQ6ISU1 281 aaPredicted RBP5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 ERMP1Q7Z2K6 904 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 FILIP1Q7Z7B0 1213 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 TTC16Q8NEE8 873 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 BAP1Q92560 729 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 KCTD15Q96SI1 283 aaPredicted RBP5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 FAM8A1Q9UBU6 413 aa5.99□□□□□ -1.45
AC055878.1-201ENST00000531858 A6NJY4 79 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 TPD52L2O43399 206 aaKnown RBP5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 GNRH1P01148 92 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 SSBP05455 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 DHX9Q08211 1270 aaKnown RBP5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 PWP1Q13610 501 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 C11orf91Q3C1V1 193 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 SLC9A9Q8IVB4 645 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 CCDC24Q8N4L8 307 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 NBPF15Q8N660 670 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 IRF2BPLQ9H1B7 796 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 OSBPL3Q9H4L5 887 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 LRFN2Q9ULH4 789 aa5.98□□□□□ -1.45
AC055878.1-201ENST00000531858 J3QL48 77 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 CDK2AP1O14519 115 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 U2SURPO15042 1029 aaKnown RBP5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 ZBTB39O15060 712 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 PARNO95453 639 aaKnown RBP5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 SCTRP47872 440 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 WNT7BP56706 349 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 DNM1Q05193 864 aaKnown RBP5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 RTN1Q16799 776 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 CYP2U1Q7Z449 544 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 FAM9AQ8IZU1 332 aaPredicted RBP5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 EDEM1Q92611 657 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 FOXJ1Q92949 421 aa5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
AC055878.1-201ENST00000531858 ERVH48-1M5A8F1 160 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 ZAP70P43403 619 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 SMTNP53814 917 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 INTS6LQ5JSJ4 861 aaKnown RBP5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 CCAR1Q8IX12 1150 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms