RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 BHMTQ93088 406 aa8.57□□□□□ -1.04
USP47-211ENST00000531513 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
USP47-211ENST00000531513 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
USP47-211ENST00000531513 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
USP47-211ENST00000531513 ALDH16A1Q8IZ83 802 aa8.56□□□□□ -1.04
USP47-211ENST00000531513 KRTAP4-12Q9BQ66 201 aa8.56□□□□□ -1.04
USP47-211ENST00000531513 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
USP47-211ENST00000531513 GRIK4Q16099 956 aa8.55□□□□□ -1.04
USP47-211ENST00000531513 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
USP47-211ENST00000531513 NGLY1Q96IV0 654 aa8.55□□□□□ -1.04
USP47-211ENST00000531513 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
USP47-211ENST00000531513 C2orf49Q9BVC5 232 aaPredicted RBP8.55□□□□□ -1.04
USP47-211ENST00000531513 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
USP47-211ENST00000531513 STAG2Q8N3U4 1231 aa8.54□□□□□ -1.04
USP47-211ENST00000531513 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
USP47-211ENST00000531513 UBE2OQ9C0C9 1292 aaKnown RBP8.54□□□□□ -1.04
USP47-211ENST00000531513 SLC6A14Q9UN76 642 aa8.54□□□□□ -1.04
USP47-211ENST00000531513 ATAD2Q6PL18 1390 aa8.53□□□□□ -1.04
USP47-211ENST00000531513 DYRK3O43781 588 aa8.53□□□□□ -1.04
USP47-211ENST00000531513 RASA1P20936 1047 aa8.53□□□□□ -1.04
USP47-211ENST00000531513 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
USP47-211ENST00000531513 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
USP47-211ENST00000531513 LILRB5O75023 590 aa8.52□□□□□ -1.05
USP47-211ENST00000531513 LCE3BQ5TA77 95 aa8.52□□□□□ -1.05
USP47-211ENST00000531513 CHMP7Q8WUX9 453 aaPredicted RBP8.52□□□□□ -1.05
USP47-211ENST00000531513 GLMNQ92990 594 aa8.52□□□□□ -1.05
USP47-211ENST00000531513 IGFLR1Q9H665 355 aa8.52□□□□□ -1.05
USP47-211ENST00000531513 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
USP47-211ENST00000531513 SEC13P55735 322 aa8.51□□□□□ -1.05
USP47-211ENST00000531513 HIF1AQ16665 826 aa8.51□□□□□ -1.05
USP47-211ENST00000531513 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
USP47-211ENST00000531513 JPH1Q9HDC5 661 aaPredicted RBP8.51□□□□□ -1.05
USP47-211ENST00000531513 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
USP47-211ENST00000531513 A0A0A0MRY4 1105 aa8.5□□□□□ -1.05
USP47-211ENST00000531513 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
USP47-211ENST00000531513 NUDT8Q8WV74 236 aa8.5□□□□□ -1.05
USP47-211ENST00000531513 NAGPAQ9UK23 515 aa8.5□□□□□ -1.05
USP47-211ENST00000531513 ELNP15502 786 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 SELPP16109 830 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 ADGRE1Q14246 886 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 MBTPS1Q14703 1052 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 RTN1Q16799 776 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 IER5Q5VY09 327 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 GSX2Q9BZM3 304 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 DNAJB12Q9NXW2 375 aaKnown RBP8.49□□□□□ -1.05
USP47-211ENST00000531513 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
USP47-211ENST00000531513 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 C9orf172C9J069 976 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 LGR5O75473 907 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 NFKB1P19838 968 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 PSAPL1Q6NUJ1 521 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
USP47-211ENST00000531513 HOMEZQ8IX15 550 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
USP47-211ENST00000531513 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
USP47-211ENST00000531513 RAC1P63000 192 aa8.47□□□□□ -1.05
USP47-211ENST00000531513 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
USP47-211ENST00000531513 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
USP47-211ENST00000531513 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
USP47-211ENST00000531513 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
USP47-211ENST00000531513 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.06
USP47-211ENST00000531513 AFF1P51825 1210 aaKnown RBP8.46□□□□□ -1.06
USP47-211ENST00000531513 CCINQ13939 588 aa8.46□□□□□ -1.06
USP47-211ENST00000531513 PRSS36Q5K4E3 855 aa8.46□□□□□ -1.06
USP47-211ENST00000531513 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
USP47-211ENST00000531513 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
USP47-211ENST00000531513 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
USP47-211ENST00000531513 DPYDQ12882 1025 aa8.45□□□□□ -1.06
USP47-211ENST00000531513 PTK7Q13308 1070 aa8.45□□□□□ -1.06
USP47-211ENST00000531513 TXNRD3Q86VQ6 643 aa8.45□□□□□ -1.06
USP47-211ENST00000531513 IGFBP4P22692 258 aa8.44□□□□□ -1.06
USP47-211ENST00000531513 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
USP47-211ENST00000531513 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
USP47-211ENST00000531513 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L21D6R901 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 RGS9O75916 674 aaPredicted RBP8.43□□□□□ -1.06
USP47-211ENST00000531513 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 KANK4Q5T7N3 995 aaPredicted RBP8.43□□□□□ -1.06
USP47-211ENST00000531513 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
USP47-211ENST00000531513 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
USP47-211ENST00000531513 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
USP47-211ENST00000531513 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 CPB1P15086 417 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 EPB42P16452 691 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 INPP5BP32019 993 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 IDH3AP50213 366 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
USP47-211ENST00000531513 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms