RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SYNE4Q8N205 404 aa29.05■■■□□ 2.24
TRAPPC4-210ENST00000531290 XAGE3Q8WTP9 111 aa29.05■■■□□ 2.24
TRAPPC4-210ENST00000531290 DDX21Q9NR30 783 aaKnown RBP eCLIP29.05■■■□□ 2.24
TRAPPC4-210ENST00000531290 NLRP3Q96P20 1036 aa29.04■■■□□ 2.24
TRAPPC4-210ENST00000531290 CRAMP1Q96RY5 1269 aa29.02■■■□□ 2.24
TRAPPC4-210ENST00000531290 RIC1Q4ADV7 1423 aa29.02■■■□□ 2.24
TRAPPC4-210ENST00000531290 IARSP41252 1262 aaKnown RBP29.01■■■□□ 2.23
TRAPPC4-210ENST00000531290 HDGFL1Q5TGJ6 251 aa29.01■■■□□ 2.23
TRAPPC4-210ENST00000531290 CFAP44Q96MT7 982 aa29.01■■■□□ 2.23
TRAPPC4-210ENST00000531290 FER1L6Q2WGJ9 1857 aa29.01■■■□□ 2.23
TRAPPC4-210ENST00000531290 IQCA1LA6NCM1 817 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 GRIPAP1Q4V328 841 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 SLC10A5Q5PT55 438 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 KLRG1Q96E93 195 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 PSMD1Q99460 953 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 TMX4Q9H1E5 349 aaPredicted RBP29■■■□□ 2.23
TRAPPC4-210ENST00000531290 CHPF2Q9P2E5 772 aa29■■■□□ 2.23
TRAPPC4-210ENST00000531290 HOXB7P09629 217 aa28.99■■■□□ 2.23
TRAPPC4-210ENST00000531290 TCIRG1Q13488 830 aa28.99■■■□□ 2.23
TRAPPC4-210ENST00000531290 TIAM2Q8IVF5 1701 aa28.99■■■□□ 2.23
TRAPPC4-210ENST00000531290 APAF1O14727 1248 aa28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 TCERG1O14776 1098 aaKnown RBP28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 PPEF1O14829 653 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 C3orf67Q6ZVT6 689 aa28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 NLRP10Q86W26 655 aa28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 JDP2Q8WYK2 163 aa28.98■■■□□ 2.23
TRAPPC4-210ENST00000531290 RNF123Q5XPI4 1314 aa28.97■■■□□ 2.23
TRAPPC4-210ENST00000531290 L3MBTL3Q96JM7 780 aaPredicted RBP28.97■■■□□ 2.23
TRAPPC4-210ENST00000531290 DBF4Q9UBU7 674 aaPredicted RBP28.97■■■□□ 2.23
TRAPPC4-210ENST00000531290 CALD1Q05682 793 aaKnown RBP28.96■■■□□ 2.23
TRAPPC4-210ENST00000531290 CHADLQ6NUI6 762 aa28.96■■■□□ 2.23
TRAPPC4-210ENST00000531290 TRMT112Q9UI30 125 aaKnown RBP28.96■■■□□ 2.23
TRAPPC4-210ENST00000531290 WDR90Q96KV7 1748 aa28.95■■■□□ 2.23
TRAPPC4-210ENST00000531290 DUSP27Q5VZP5 1158 aa28.95■■■□□ 2.22
TRAPPC4-210ENST00000531290 MBIPQ9NS73 344 aa28.95■■■□□ 2.22
TRAPPC4-210ENST00000531290 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
TRAPPC4-210ENST00000531290 ARFGEF2Q9Y6D5 1785 aa28.94■■■□□ 2.22
TRAPPC4-210ENST00000531290 FZD9O00144 591 aa28.94■■■□□ 2.22
TRAPPC4-210ENST00000531290 ANKRD13DQ6ZTN6 518 aa28.94■■■□□ 2.22
TRAPPC4-210ENST00000531290 NUP98P52948 1817 aa28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 HCLS1P14317 486 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 PLBD2Q8NHP8 589 aa28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 TAF1DQ9H5J8 278 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 HYPKQ9NX55 129 aa28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 CCDC88AQ3V6T2 1871 aa28.93■■■□□ 2.22
TRAPPC4-210ENST00000531290 IFT57Q9NWB7 429 aa28.92■■■□□ 2.22
TRAPPC4-210ENST00000531290 HACL1Q9UJ83 578 aa28.92■■■□□ 2.22
TRAPPC4-210ENST00000531290 SH3TC1Q8TE82 1336 aa28.92■■■□□ 2.22
TRAPPC4-210ENST00000531290 ZNF853P0CG23 659 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 POTEIP0CG38 1075 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 POTEJP0CG39 1038 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 EIF6P56537 245 aaKnown RBP28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 GNAI1P63096 354 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 LARGE2Q8N3Y3 721 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 ATP6V0A2Q9Y487 856 aa28.91■■■□□ 2.22
TRAPPC4-210ENST00000531290 BBOX1O75936 387 aa28.9■■■□□ 2.22
TRAPPC4-210ENST00000531290 LDHDQ86WU2 507 aa28.9■■■□□ 2.22
TRAPPC4-210ENST00000531290 GPC2Q8N158 579 aa28.9■■■□□ 2.22
TRAPPC4-210ENST00000531290 JMYQ8N9B5 988 aa28.9■■■□□ 2.22
TRAPPC4-210ENST00000531290 CACNA1SQ13698 1873 aa28.89■■■□□ 2.22
TRAPPC4-210ENST00000531290 SNED1Q8TER0 1413 aa28.89■■■□□ 2.22
TRAPPC4-210ENST00000531290 EAPPQ56P03 285 aaPredicted RBP28.89■■■□□ 2.22
TRAPPC4-210ENST00000531290 DDX46Q7L014 1031 aaKnown RBP28.89■■■□□ 2.22
TRAPPC4-210ENST00000531290 ABCC4O15439 1325 aa28.89■■■□□ 2.21
TRAPPC4-210ENST00000531290 DICER1Q9UPY3 1922 aaKnown RBP28.88■■■□□ 2.21
TRAPPC4-210ENST00000531290 EPHX2P34913 555 aa28.87■■■□□ 2.21
TRAPPC4-210ENST00000531290 CLEC11AQ9Y240 323 aa28.87■■■□□ 2.21
TRAPPC4-210ENST00000531290 GJA3Q9Y6H8 435 aa28.87■■■□□ 2.21
TRAPPC4-210ENST00000531290 ELL2O00472 640 aaPredicted RBP28.86■■■□□ 2.21
TRAPPC4-210ENST00000531290 IFFO2Q5TF58 517 aa28.86■■■□□ 2.21
TRAPPC4-210ENST00000531290 PNMA8AQ86V59 439 aaPredicted RBP28.86■■■□□ 2.21
TRAPPC4-210ENST00000531290 ZNF428Q96B54 188 aa28.86■■■□□ 2.21
TRAPPC4-210ENST00000531290 ATP5J2-PTCD1G3V325 749 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 SLC51AQ86UW1 340 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 SP8Q8IXZ3 490 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 NIM1KQ8IY84 436 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 SUPT20HQ8NEM7 779 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
TRAPPC4-210ENST00000531290 PPIP5K2O43314 1243 aa28.84■■■□□ 2.21
TRAPPC4-210ENST00000531290 VPS33BQ9H267 617 aa28.84■■■□□ 2.21
TRAPPC4-210ENST00000531290 GRAPQ13588 217 aa28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 DPP8Q6V1X1 898 aaPredicted RBP28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 RIC3Q7Z5B4 369 aa28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 GRAPLQ8TC17 118 aaPredicted RBP28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 FAM89AQ96GI7 184 aa28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 CHMP4AQ9BY43 222 aa28.83■■■□□ 2.21
TRAPPC4-210ENST00000531290 GOLGA2Q08379 1002 aa28.82■■■□□ 2.2
TRAPPC4-210ENST00000531290 CREBZFQ9NS37 354 aa28.82■■■□□ 2.2
TRAPPC4-210ENST00000531290 LMOD1P29536 600 aaPredicted RBP28.81■■■□□ 2.2
TRAPPC4-210ENST00000531290 AOC3Q16853 763 aa28.81■■■□□ 2.2
TRAPPC4-210ENST00000531290 MPNDQ8N594 471 aa28.81■■■□□ 2.2
TRAPPC4-210ENST00000531290 TRIM28Q13263 835 aaKnown RBP28.8■■■□□ 2.2
TRAPPC4-210ENST00000531290 RTFDC1Q9BY42 306 aaPredicted RBP28.8■■■□□ 2.2
TRAPPC4-210ENST00000531290 CCDC184Q52MB2 194 aa28.79■■■□□ 2.2
TRAPPC4-210ENST00000531290 TMC4Q7Z404 712 aa28.79■■■□□ 2.2
TRAPPC4-210ENST00000531290 C8orf58Q8NAV2 365 aa28.79■■■□□ 2.2
TRAPPC4-210ENST00000531290 RTL5Q5HYW3 569 aaPredicted RBP28.78■■■□□ 2.2
TRAPPC4-210ENST00000531290 PHAXQ9H814 394 aaKnown RBP28.78■■■□□ 2.2
TRAPPC4-210ENST00000531290 SF3B3Q15393 1217 aaKnown RBP28.77■■■□□ 2.2
TRAPPC4-210ENST00000531290 CCDC30Q5VVM6 783 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms