RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 UTP14AQ9BVJ6 771 aaKnown RBP24.53■■□□□ 1.52
UBXN1-211ENST00000531056 PHAXQ9H814 394 aaKnown RBP24.53■■□□□ 1.52
UBXN1-211ENST00000531056 RNF123Q5XPI4 1314 aa24.53■■□□□ 1.52
UBXN1-211ENST00000531056 CCDC88AQ3V6T2 1871 aa24.53■■□□□ 1.52
UBXN1-211ENST00000531056 NFKBIEO00221 500 aa24.52■■□□□ 1.52
UBXN1-211ENST00000531056 PRELPP51888 382 aa24.52■■□□□ 1.52
UBXN1-211ENST00000531056 TIAM2Q8IVF5 1701 aa24.52■■□□□ 1.52
UBXN1-211ENST00000531056 TWISTNBQ3B726 338 aaPredicted RBP24.51■■□□□ 1.51
UBXN1-211ENST00000531056 CHMP4AQ9BY43 222 aa24.51■■□□□ 1.51
UBXN1-211ENST00000531056 RNF181Q9P0P0 153 aa24.51■■□□□ 1.51
UBXN1-211ENST00000531056 ZNF219Q9P2Y4 722 aaPredicted RBP24.51■■□□□ 1.51
UBXN1-211ENST00000531056 DDX60Q8IY21 1712 aaKnown RBP24.5■■□□□ 1.51
UBXN1-211ENST00000531056 C7orf43Q8WVR3 580 aa24.5■■□□□ 1.51
UBXN1-211ENST00000531056 ISCA1Q9BUE6 129 aa24.5■■□□□ 1.51
UBXN1-211ENST00000531056 SPINK5Q9NQ38 1064 aaPredicted RBP24.5■■□□□ 1.51
UBXN1-211ENST00000531056 SLC10A5Q5PT55 438 aa24.49■■□□□ 1.51
UBXN1-211ENST00000531056 C3orf67Q6ZVT6 689 aa24.49■■□□□ 1.51
UBXN1-211ENST00000531056 ZNF521Q96K83 1311 aa24.49■■□□□ 1.51
UBXN1-211ENST00000531056 DICER1Q9UPY3 1922 aaKnown RBP24.49■■□□□ 1.51
UBXN1-211ENST00000531056 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
UBXN1-211ENST00000531056 GOLGA2Q08379 1002 aa24.48■■□□□ 1.51
UBXN1-211ENST00000531056 ZNF526Q8TF50 670 aaPredicted RBP24.48■■□□□ 1.51
UBXN1-211ENST00000531056 GPBP1L1Q9HC44 474 aaPredicted RBP24.48■■□□□ 1.51
UBXN1-211ENST00000531056 LTBP3Q9NS15 1303 aa24.47■■□□□ 1.51
UBXN1-211ENST00000531056 LMNB1P20700 586 aa24.47■■□□□ 1.51
UBXN1-211ENST00000531056 ALDH1B1P30837 517 aa24.47■■□□□ 1.51
UBXN1-211ENST00000531056 HOXA10P31260 410 aaPredicted RBP24.47■■□□□ 1.51
UBXN1-211ENST00000531056 SOGA3Q5TF21 947 aa24.47■■□□□ 1.51
UBXN1-211ENST00000531056 SYNE4Q8N205 404 aa24.46■■□□□ 1.51
UBXN1-211ENST00000531056 TRMT112Q9UI30 125 aaKnown RBP24.46■■□□□ 1.51
UBXN1-211ENST00000531056 SNED1Q8TER0 1413 aa24.45■■□□□ 1.51
UBXN1-211ENST00000531056 ATP5J2-PTCD1G3V325 749 aa24.45■■□□□ 1.5
UBXN1-211ENST00000531056 RIC3Q7Z5B4 369 aa24.45■■□□□ 1.5
UBXN1-211ENST00000531056 RPGRQ92834 1020 aaKnown RBP24.45■■□□□ 1.5
UBXN1-211ENST00000531056 CACNA1FO60840 1977 aa24.45■■□□□ 1.5
UBXN1-211ENST00000531056 SH3TC1Q8TE82 1336 aa24.44■■□□□ 1.5
UBXN1-211ENST00000531056 ZC3H4Q9UPT8 1303 aaKnown RBP24.44■■□□□ 1.5
UBXN1-211ENST00000531056 EXOSC9Q06265 439 aaKnown RBP24.44■■□□□ 1.5
UBXN1-211ENST00000531056 TRIM28Q13263 835 aaKnown RBP24.44■■□□□ 1.5
UBXN1-211ENST00000531056 NLRP3Q96P20 1036 aa24.44■■□□□ 1.5
UBXN1-211ENST00000531056 STK31Q9BXU1 1019 aa24.44■■□□□ 1.5
UBXN1-211ENST00000531056 TCERG1O14776 1098 aaKnown RBP24.43■■□□□ 1.5
UBXN1-211ENST00000531056 CCDC93Q567U6 631 aa24.43■■□□□ 1.5
UBXN1-211ENST00000531056 CRAMP1Q96RY5 1269 aa24.43■■□□□ 1.5
UBXN1-211ENST00000531056 TAOK3Q9H2K8 898 aa24.43■■□□□ 1.5
UBXN1-211ENST00000531056 VAMP4O75379 141 aa24.42■■□□□ 1.5
UBXN1-211ENST00000531056 HCLS1P14317 486 aaPredicted RBP24.42■■□□□ 1.5
UBXN1-211ENST00000531056 OLFM4Q6UX06 510 aa24.42■■□□□ 1.5
UBXN1-211ENST00000531056 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
UBXN1-211ENST00000531056 RBM17Q96I25 401 aaKnown RBP24.42■■□□□ 1.5
UBXN1-211ENST00000531056 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
UBXN1-211ENST00000531056 DDX58O95786 925 aaKnown RBP24.41■■□□□ 1.5
UBXN1-211ENST00000531056 G2E3Q7L622 706 aa24.4■■□□□ 1.5
UBXN1-211ENST00000531056 MYD88Q99836 296 aa24.4■■□□□ 1.5
UBXN1-211ENST00000531056 METTL22Q9BUU2 404 aaPredicted RBP24.4■■□□□ 1.5
UBXN1-211ENST00000531056 SLC4A2P04920 1241 aa24.39■■□□□ 1.49
UBXN1-211ENST00000531056 FAM89AQ96GI7 184 aa24.39■■□□□ 1.49
UBXN1-211ENST00000531056 MAP3K2Q9Y2U5 619 aa24.39■■□□□ 1.49
UBXN1-211ENST00000531056 KIF3CO14782 793 aa24.38■■□□□ 1.49
UBXN1-211ENST00000531056 C1QTNF8P60827 252 aa24.38■■□□□ 1.49
UBXN1-211ENST00000531056 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.49
UBXN1-211ENST00000531056 KSR2Q6VAB6 950 aa24.38■■□□□ 1.49
UBXN1-211ENST00000531056 RTKN2Q8IZC4 609 aa24.38■■□□□ 1.49
UBXN1-211ENST00000531056 ABCC4O15439 1325 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 TAF1P21675 1872 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 PI4KAP2A4QPH2 592 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 SLC51AQ86UW1 340 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 PI4KAP1Q8N8J0 262 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
UBXN1-211ENST00000531056 PPEF1O14829 653 aaPredicted RBP24.36■■□□□ 1.49
UBXN1-211ENST00000531056 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
UBXN1-211ENST00000531056 NMRK2Q9NPI5 230 aa24.36■■□□□ 1.49
UBXN1-211ENST00000531056 FLIIQ13045 1269 aa24.35■■□□□ 1.49
UBXN1-211ENST00000531056 CC2D2BQ6DHV5 1058 aa24.35■■□□□ 1.49
UBXN1-211ENST00000531056 KDM2BQ8NHM5 1336 aa24.35■■□□□ 1.49
UBXN1-211ENST00000531056 COL4A1P02462 1669 aa24.34■■□□□ 1.49
UBXN1-211ENST00000531056 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
UBXN1-211ENST00000531056 PSMD1Q99460 953 aa24.34■■□□□ 1.49
UBXN1-211ENST00000531056 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
UBXN1-211ENST00000531056 LRRC37AA6NMS7 1700 aa24.34■■□□□ 1.49
UBXN1-211ENST00000531056 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
UBXN1-211ENST00000531056 PCCAP05165 728 aaPredicted RBP24.33■■□□□ 1.49
UBXN1-211ENST00000531056 IGKV5-2P06315 115 aa24.33■■□□□ 1.49
UBXN1-211ENST00000531056 SF3B3Q15393 1217 aaKnown RBP24.33■■□□□ 1.49
UBXN1-211ENST00000531056 RTL5Q5HYW3 569 aaPredicted RBP24.33■■□□□ 1.49
UBXN1-211ENST00000531056 WDR90Q96KV7 1748 aa24.32■■□□□ 1.48
UBXN1-211ENST00000531056 GLTPD2A6NH11 291 aa24.32■■□□□ 1.48
UBXN1-211ENST00000531056 DDX46Q7L014 1031 aaKnown RBP24.32■■□□□ 1.48
UBXN1-211ENST00000531056 ZNF277Q9NRM2 450 aaPredicted RBP24.32■■□□□ 1.48
UBXN1-211ENST00000531056 E9PSI1 815 aa24.31■■□□□ 1.48
UBXN1-211ENST00000531056 GRAPQ13588 217 aa24.31■■□□□ 1.48
UBXN1-211ENST00000531056 GRIPAP1Q4V328 841 aa24.31■■□□□ 1.48
UBXN1-211ENST00000531056 GRAPLQ8TC17 118 aaPredicted RBP24.31■■□□□ 1.48
UBXN1-211ENST00000531056 ATP6V0A2Q9Y487 856 aa24.31■■□□□ 1.48
UBXN1-211ENST00000531056 COL4A5P29400 1685 aa24.3■■□□□ 1.48
UBXN1-211ENST00000531056 BBOX1O75936 387 aa24.29■■□□□ 1.48
UBXN1-211ENST00000531056 IARSP41252 1262 aaKnown RBP24.29■■□□□ 1.48
UBXN1-211ENST00000531056 SLFN5Q08AF3 891 aa24.29■■□□□ 1.48
UBXN1-211ENST00000531056 NEXNQ0ZGT2 675 aa24.29■■□□□ 1.48
UBXN1-211ENST00000531056 FKBP5Q13451 457 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms