RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 TNRC6CQ9HCJ0 1690 aaKnown RBP16.69■□□□□ 0.26
LINC01016-204ENST00000531046 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
LINC01016-204ENST00000531046 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
LINC01016-204ENST00000531046 C21orf2O43822 256 aa16.69■□□□□ 0.26
LINC01016-204ENST00000531046 RASSF7Q02833 373 aa16.69■□□□□ 0.26
LINC01016-204ENST00000531046 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
LINC01016-204ENST00000531046 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
LINC01016-204ENST00000531046 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
LINC01016-204ENST00000531046 NPR1P16066 1061 aa16.68■□□□□ 0.26
LINC01016-204ENST00000531046 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
LINC01016-204ENST00000531046 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
LINC01016-204ENST00000531046 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
LINC01016-204ENST00000531046 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
LINC01016-204ENST00000531046 ARFGEF2Q9Y6D5 1785 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 VAMP4O75379 141 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 G2E3Q7L622 706 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 ISCA1Q9BUE6 129 aa16.67■□□□□ 0.26
LINC01016-204ENST00000531046 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
LINC01016-204ENST00000531046 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
LINC01016-204ENST00000531046 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
LINC01016-204ENST00000531046 MYD88Q99836 296 aa16.66■□□□□ 0.26
LINC01016-204ENST00000531046 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
LINC01016-204ENST00000531046 CRY2Q49AN0 593 aa16.65■□□□□ 0.26
LINC01016-204ENST00000531046 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
LINC01016-204ENST00000531046 RPGRQ92834 1020 aaKnown RBP16.65■□□□□ 0.26
LINC01016-204ENST00000531046 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
LINC01016-204ENST00000531046 ADCY9O60503 1353 aa16.64■□□□□ 0.26
LINC01016-204ENST00000531046 PI4KAP2A4QPH2 592 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 NFKBIEO00221 500 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 PI4KAP1Q8N8J0 262 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 MAP3K2Q9Y2U5 619 aa16.64■□□□□ 0.25
LINC01016-204ENST00000531046 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 ALDH1B1P30837 517 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 PRELPP51888 382 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 KSR2Q6VAB6 950 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 RNF123Q5XPI4 1314 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
LINC01016-204ENST00000531046 FLIIQ13045 1269 aa16.62■□□□□ 0.25
LINC01016-204ENST00000531046 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
LINC01016-204ENST00000531046 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
LINC01016-204ENST00000531046 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
LINC01016-204ENST00000531046 SBF1O95248 1867 aa16.62■□□□□ 0.25
LINC01016-204ENST00000531046 E9PSI1 815 aa16.61■□□□□ 0.25
LINC01016-204ENST00000531046 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
LINC01016-204ENST00000531046 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
LINC01016-204ENST00000531046 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
LINC01016-204ENST00000531046 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
LINC01016-204ENST00000531046 LMNB1P20700 586 aa16.6■□□□□ 0.25
LINC01016-204ENST00000531046 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
LINC01016-204ENST00000531046 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
LINC01016-204ENST00000531046 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
LINC01016-204ENST00000531046 LAMB2P55268 1798 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 SOGA3Q5TF21 947 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
LINC01016-204ENST00000531046 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
LINC01016-204ENST00000531046 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
LINC01016-204ENST00000531046 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
LINC01016-204ENST00000531046 NEXNQ0ZGT2 675 aa16.58■□□□□ 0.24
LINC01016-204ENST00000531046 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
LINC01016-204ENST00000531046 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
LINC01016-204ENST00000531046 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
LINC01016-204ENST00000531046 DDX60Q8IY21 1712 aaKnown RBP16.58■□□□□ 0.24
LINC01016-204ENST00000531046 CACNA1FO60840 1977 aa16.58■□□□□ 0.24
LINC01016-204ENST00000531046 ABCC4O15439 1325 aa16.57■□□□□ 0.24
LINC01016-204ENST00000531046 PPEF1O14829 653 aaPredicted RBP16.57■□□□□ 0.24
LINC01016-204ENST00000531046 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
LINC01016-204ENST00000531046 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
LINC01016-204ENST00000531046 DDX46Q7L014 1031 aaKnown RBP16.56■□□□□ 0.24
LINC01016-204ENST00000531046 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
LINC01016-204ENST00000531046 TAF1P21675 1872 aa16.56■□□□□ 0.24
LINC01016-204ENST00000531046 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
LINC01016-204ENST00000531046 F6X3S4 739 aa16.55■□□□□ 0.24
LINC01016-204ENST00000531046 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC01016-204ENST00000531046 RTKN2Q8IZC4 609 aa16.55■□□□□ 0.24
LINC01016-204ENST00000531046 ZNF277Q9NRM2 450 aaPredicted RBP16.55■□□□□ 0.24
LINC01016-204ENST00000531046 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
LINC01016-204ENST00000531046 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
LINC01016-204ENST00000531046 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC01016-204ENST00000531046 GRAPQ13588 217 aa16.53■□□□□ 0.24
LINC01016-204ENST00000531046 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
LINC01016-204ENST00000531046 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
LINC01016-204ENST00000531046 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
LINC01016-204ENST00000531046 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
LINC01016-204ENST00000531046 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
LINC01016-204ENST00000531046 PDE8AO60658 829 aa16.52■□□□□ 0.24
LINC01016-204ENST00000531046 BBOX1O75936 387 aa16.52■□□□□ 0.24
LINC01016-204ENST00000531046 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
LINC01016-204ENST00000531046 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
LINC01016-204ENST00000531046 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms