RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
CTNND1-228ENST00000531007 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
CTNND1-228ENST00000531007 DNAAF4Q8WXU2 420 aa12.4□□□□□ -0.42
CTNND1-228ENST00000531007 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
CTNND1-228ENST00000531007 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
CTNND1-228ENST00000531007 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
CTNND1-228ENST00000531007 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 EMP3P54852 163 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-228ENST00000531007 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
CTNND1-228ENST00000531007 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
CTNND1-228ENST00000531007 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 HOXB1P14653 301 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-228ENST00000531007 SLC4A10Q6U841 1118 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 RPAP2Q8IXW5 612 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-228ENST00000531007 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
CTNND1-228ENST00000531007 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
CTNND1-228ENST00000531007 SIK1P57059 783 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 LINS1Q8NG48 757 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 ADCY9O60503 1353 aa12.37□□□□□ -0.43
CTNND1-228ENST00000531007 F6X3S4 739 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-228ENST00000531007 MYL6BP14649 208 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 NPM2Q86SE8 214 aaKnown RBP12.36□□□□□ -0.43
CTNND1-228ENST00000531007 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
CTNND1-228ENST00000531007 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 HMMRO75330 724 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 GNAI2P04899 355 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 NBPF14Q5TI25 921 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 NBPF10Q6P3W6 841 aaKnown RBP12.35□□□□□ -0.43
CTNND1-228ENST00000531007 NBPF15Q8N660 670 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-228ENST00000531007 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
CTNND1-228ENST00000531007 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 A1BGP04217 495 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-228ENST00000531007 TJP1Q07157 1748 aa12.34□□□□□ -0.43
CTNND1-228ENST00000531007 RREB1Q92766 1687 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 SBF2Q86WG5 1849 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 A0A087WZG4 1122 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 KCNQ2O43526 872 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 ANXA1P04083 346 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.44
CTNND1-228ENST00000531007 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
CTNND1-228ENST00000531007 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
CTNND1-228ENST00000531007 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 UTYO14607 1347 aa12.33□□□□□ -0.44
CTNND1-228ENST00000531007 COL15A1P39059 1388 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 ERVV-1B6SEH8 477 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
CTNND1-228ENST00000531007 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 MEIS3Q99687 375 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 CCDC87Q9NVE4 849 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
CTNND1-228ENST00000531007 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 BTAF1O14981 1849 aa12.32□□□□□ -0.44
CTNND1-228ENST00000531007 FOXK1P85037 733 aa12.31□□□□□ -0.44
CTNND1-228ENST00000531007 SMC5Q8IY18 1101 aa12.31□□□□□ -0.44
CTNND1-228ENST00000531007 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
CTNND1-228ENST00000531007 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-228ENST00000531007 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
CTNND1-228ENST00000531007 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 GRM8O00222 908 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 SLC34A2O95436 690 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 IGHDP01880 384 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
CTNND1-228ENST00000531007 EIF5P55010 431 aaKnown RBP12.3□□□□□ -0.44
CTNND1-228ENST00000531007 GCKRQ14397 625 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 CEP85Q6P2H3 762 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTNND1-228ENST00000531007 LY75O60449 1722 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 ARFGEF2Q9Y6D5 1785 aa12.3□□□□□ -0.44
CTNND1-228ENST00000531007 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-228ENST00000531007 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms