RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 GJA3Q9Y6H8 435 aa14.35□□□□□ -0.11
TM9SF1-210ENST00000530563 TLL2Q9Y6L7 1015 aa14.35□□□□□ -0.11
TM9SF1-210ENST00000530563 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
TM9SF1-210ENST00000530563 AOC2O75106 756 aa14.34□□□□□ -0.11
TM9SF1-210ENST00000530563 PRKAR2BP31323 418 aa14.34□□□□□ -0.11
TM9SF1-210ENST00000530563 CC2D2BQ6DHV5 1058 aa14.34□□□□□ -0.11
TM9SF1-210ENST00000530563 USP50Q70EL3 339 aaPredicted RBP14.34□□□□□ -0.11
TM9SF1-210ENST00000530563 ECE1P42892 770 aa14.33□□□□□ -0.12
TM9SF1-210ENST00000530563 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
TM9SF1-210ENST00000530563 MCM10Q7L590 875 aa14.33□□□□□ -0.12
TM9SF1-210ENST00000530563 NUTM1Q86Y26 1132 aa14.33□□□□□ -0.12
TM9SF1-210ENST00000530563 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
TM9SF1-210ENST00000530563 MAP2K2P36507 400 aa14.32□□□□□ -0.12
TM9SF1-210ENST00000530563 RIC1Q4ADV7 1423 aa14.32□□□□□ -0.12
TM9SF1-210ENST00000530563 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
TM9SF1-210ENST00000530563 DCTN1Q14203 1278 aa14.31□□□□□ -0.12
TM9SF1-210ENST00000530563 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
TM9SF1-210ENST00000530563 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
TM9SF1-210ENST00000530563 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
TM9SF1-210ENST00000530563 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 ERVV-1B6SEH8 477 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 GRM1Q13255 1194 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 GRIPAP1Q4V328 841 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 MCOLN1Q9GZU1 580 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 PCDH10Q9P2E7 1040 aa14.3□□□□□ -0.12
TM9SF1-210ENST00000530563 GTF2E1P29083 439 aaPredicted RBP14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 UBN2Q6ZU65 1347 aa14.29□□□□□ -0.12
TM9SF1-210ENST00000530563 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 CXCL9Q07325 125 aa14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 SUSD4Q5VX71 490 aa14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 ZNF34Q8IZ26 560 aa14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 ADARB2Q9NS39 739 aaKnown RBP14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
TM9SF1-210ENST00000530563 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.12
TM9SF1-210ENST00000530563 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
TM9SF1-210ENST00000530563 CA12O43570 354 aa14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 GLIS2Q9BZE0 524 aaPredicted RBP14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 NUP98P52948 1817 aa14.27□□□□□ -0.13
TM9SF1-210ENST00000530563 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 NTSR2O95665 410 aa14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 BRPF1P55201 1214 aaPredicted RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 CNGB1Q14028 1251 aaPredicted RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 AOC3Q16853 763 aa14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 NIM1KQ8IY84 436 aa14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 RTF1Q92541 710 aaKnown RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 VPS33BQ9H267 617 aa14.26□□□□□ -0.13
TM9SF1-210ENST00000530563 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 PPIP5K2O43314 1243 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 GPTP24298 496 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 GMPSP49915 693 aaPredicted RBP14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 ZNRF3Q9ULT6 936 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 ATP6V0A2Q9Y487 856 aa14.25□□□□□ -0.13
TM9SF1-210ENST00000530563 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
TM9SF1-210ENST00000530563 CIAPIN1Q6FI81 312 aa14.24□□□□□ -0.13
TM9SF1-210ENST00000530563 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
TM9SF1-210ENST00000530563 LAMB4A4D0S4 1761 aa14.24□□□□□ -0.13
TM9SF1-210ENST00000530563 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 EIF4A1P60842 406 aaKnown RBP14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 ZBTB3Q9H5J0 574 aa14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
TM9SF1-210ENST00000530563 DGKZQ13574 1117 aa14.22□□□□□ -0.13
TM9SF1-210ENST00000530563 DLK2Q6UY11 383 aa14.22□□□□□ -0.13
TM9SF1-210ENST00000530563 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
TM9SF1-210ENST00000530563 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
TM9SF1-210ENST00000530563 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
TM9SF1-210ENST00000530563 ABCC4O15439 1325 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 SHTN1A0MZ66 631 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 MYL6BP14649 208 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 KIAA2012Q0VF49 1180 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 KDM3BQ7LBC6 1761 aa14.21□□□□□ -0.13
TM9SF1-210ENST00000530563 YDJCA8MPS7 323 aa14.2□□□□□ -0.14
TM9SF1-210ENST00000530563 FAM155AB1AL88 458 aaPredicted RBP14.2□□□□□ -0.14
TM9SF1-210ENST00000530563 RAD17O75943 681 aa14.2□□□□□ -0.14
TM9SF1-210ENST00000530563 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
TM9SF1-210ENST00000530563 NOGQ13253 232 aa14.2□□□□□ -0.14
TM9SF1-210ENST00000530563 PDIA6Q15084 440 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms