RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 TRAF5O00463 557 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 ALDH1B1P30837 517 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 CYP4F22Q6NT55 531 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
USP35-205ENST00000530521 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
USP35-205ENST00000530521 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
USP35-205ENST00000530521 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
USP35-205ENST00000530521 CST9Q5W186 159 aa11.56□□□□□ -0.56
USP35-205ENST00000530521 GPC2Q8N158 579 aa11.56□□□□□ -0.56
USP35-205ENST00000530521 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
USP35-205ENST00000530521 AOC2O75106 756 aa11.55□□□□□ -0.56
USP35-205ENST00000530521 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
USP35-205ENST00000530521 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
USP35-205ENST00000530521 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
USP35-205ENST00000530521 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
USP35-205ENST00000530521 GPTP24298 496 aa11.54□□□□□ -0.56
USP35-205ENST00000530521 SCNN1DP51172 638 aa11.54□□□□□ -0.56
USP35-205ENST00000530521 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
USP35-205ENST00000530521 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
USP35-205ENST00000530521 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
USP35-205ENST00000530521 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
USP35-205ENST00000530521 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
USP35-205ENST00000530521 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
USP35-205ENST00000530521 MYL6BP14649 208 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP35-205ENST00000530521 RALBP1Q15311 655 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 PSMD1Q99460 953 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 POLR2AP24928 1970 aaKnown RBP11.53□□□□□ -0.56
USP35-205ENST00000530521 TAF1P21675 1872 aa11.53□□□□□ -0.56
USP35-205ENST00000530521 DLG5Q8TDM6 1919 aa11.52□□□□□ -0.56
USP35-205ENST00000530521 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
USP35-205ENST00000530521 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
USP35-205ENST00000530521 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
USP35-205ENST00000530521 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
USP35-205ENST00000530521 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 SLC34A2O95436 690 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
USP35-205ENST00000530521 AOC3Q16853 763 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 RPGRQ92834 1020 aaKnown RBP11.51□□□□□ -0.57
USP35-205ENST00000530521 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
USP35-205ENST00000530521 MLLT1Q03111 559 aaPredicted RBP11.5□□□□□ -0.57
USP35-205ENST00000530521 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
USP35-205ENST00000530521 BEGAINQ9BUH8 593 aa11.5□□□□□ -0.57
USP35-205ENST00000530521 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
USP35-205ENST00000530521 UBN2Q6ZU65 1347 aa11.5□□□□□ -0.57
USP35-205ENST00000530521 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 HOXA10P31260 410 aaPredicted RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 ECE1P42892 770 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 CXCL9Q07325 125 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 CFAP53Q96M91 514 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 ZIC5Q96T25 663 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 MAP3K15Q6ZN16 1313 aa11.49□□□□□ -0.57
USP35-205ENST00000530521 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
USP35-205ENST00000530521 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 PPIP5K2O43314 1243 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
USP35-205ENST00000530521 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
USP35-205ENST00000530521 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 CRAMP1Q96RY5 1269 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
USP35-205ENST00000530521 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 RAD17O75943 681 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 RGS19P49795 217 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 GMPSP49915 693 aaPredicted RBP11.47□□□□□ -0.57
USP35-205ENST00000530521 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 KIF6Q6ZMV9 814 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 SAPCD2Q86UD0 394 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 ZNF34Q8IZ26 560 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 MCOLN1Q9GZU1 580 aa11.47□□□□□ -0.57
USP35-205ENST00000530521 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
USP35-205ENST00000530521 RGL2O15211 777 aa11.46□□□□□ -0.57
USP35-205ENST00000530521 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.57
USP35-205ENST00000530521 NTSR2O95665 410 aa11.46□□□□□ -0.57
USP35-205ENST00000530521 ANXA1P04083 346 aa11.46□□□□□ -0.57
USP35-205ENST00000530521 EIF4A1P60842 406 aaKnown RBP11.46□□□□□ -0.57
USP35-205ENST00000530521 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
USP35-205ENST00000530521 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
USP35-205ENST00000530521 LAMB2P55268 1798 aa11.46□□□□□ -0.58
USP35-205ENST00000530521 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
USP35-205ENST00000530521 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
USP35-205ENST00000530521 MAP2K2P36507 400 aa11.45□□□□□ -0.58
USP35-205ENST00000530521 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
USP35-205ENST00000530521 ZNRF3Q9ULT6 936 aa11.45□□□□□ -0.58
USP35-205ENST00000530521 KDM3BQ7LBC6 1761 aa11.45□□□□□ -0.58
USP35-205ENST00000530521 THSD7BQ9C0I4 1608 aa11.45□□□□□ -0.58
USP35-205ENST00000530521 HCLS1P14317 486 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms