RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
USP35-204ENST00000530267 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
USP35-204ENST00000530267 GLI3P10071 1580 aa18.32■□□□□ 0.52
USP35-204ENST00000530267 RFX5P48382 616 aaPredicted RBP18.32■□□□□ 0.52
USP35-204ENST00000530267 MCM2P49736 904 aa18.32■□□□□ 0.52
USP35-204ENST00000530267 NKX1-1Q15270 411 aaPredicted RBP18.32■□□□□ 0.52
USP35-204ENST00000530267 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
USP35-204ENST00000530267 PRPF40BQ6NWY9 871 aaKnown RBP18.31■□□□□ 0.52
USP35-204ENST00000530267 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
USP35-204ENST00000530267 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
USP35-204ENST00000530267 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
USP35-204ENST00000530267 CASP7P55210 303 aa18.3■□□□□ 0.52
USP35-204ENST00000530267 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
USP35-204ENST00000530267 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
USP35-204ENST00000530267 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
USP35-204ENST00000530267 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
USP35-204ENST00000530267 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
USP35-204ENST00000530267 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
USP35-204ENST00000530267 ABCA3Q99758 1704 aa18.3■□□□□ 0.52
USP35-204ENST00000530267 DTNBO60941 627 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
USP35-204ENST00000530267 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
USP35-204ENST00000530267 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
USP35-204ENST00000530267 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
USP35-204ENST00000530267 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
USP35-204ENST00000530267 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 KCPQ6ZWJ8 1503 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
USP35-204ENST00000530267 CLEC17AQ6ZS10 378 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
USP35-204ENST00000530267 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 KCNJ4P48050 445 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 CUL4AQ13619 759 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 AK2P54819 239 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 FOXO4P98177 505 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
USP35-204ENST00000530267 PIGBQ92521 554 aa18.28■□□□□ 0.52
USP35-204ENST00000530267 H7C1W4 665 aa18.27■□□□□ 0.52
USP35-204ENST00000530267 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
USP35-204ENST00000530267 JAKMIP1Q96N16 626 aaKnown RBP18.27■□□□□ 0.52
USP35-204ENST00000530267 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
USP35-204ENST00000530267 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
USP35-204ENST00000530267 CHGBP05060 677 aa18.27■□□□□ 0.51
USP35-204ENST00000530267 IL17RAQ96F46 866 aa18.27■□□□□ 0.51
USP35-204ENST00000530267 ZNF594Q96JF6 807 aaPredicted RBP18.27■□□□□ 0.51
USP35-204ENST00000530267 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
USP35-204ENST00000530267 SHANK3Q9BYB0 1731 aa18.26■□□□□ 0.51
USP35-204ENST00000530267 PRPF40AO75400 957 aaKnown RBP18.26■□□□□ 0.51
USP35-204ENST00000530267 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
USP35-204ENST00000530267 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
USP35-204ENST00000530267 NEUROD6Q96NK8 337 aa18.25■□□□□ 0.51
USP35-204ENST00000530267 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
USP35-204ENST00000530267 RBM8AQ9Y5S9 174 aaKnown RBP18.25■□□□□ 0.51
USP35-204ENST00000530267 CCDC171Q6TFL3 1326 aa18.25■□□□□ 0.51
USP35-204ENST00000530267 PTMSP20962 102 aa18.25■□□□□ 0.51
USP35-204ENST00000530267 GAS2L3Q86XJ1 694 aa18.25■□□□□ 0.51
USP35-204ENST00000530267 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
USP35-204ENST00000530267 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
USP35-204ENST00000530267 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
USP35-204ENST00000530267 TTC14Q96N46 770 aa18.24■□□□□ 0.51
USP35-204ENST00000530267 LMBRD1Q9NUN5 540 aa18.24■□□□□ 0.51
USP35-204ENST00000530267 A0A0G2JS52 829 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 TIMM10P62072 90 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 COL9A3Q14050 684 aaPredicted RBP18.23■□□□□ 0.51
USP35-204ENST00000530267 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
USP35-204ENST00000530267 HIP1O00291 1037 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
USP35-204ENST00000530267 LARGE1O95461 756 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 ATP5JP18859 108 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
USP35-204ENST00000530267 CCDC191Q8NCU4 936 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 NHSL1Q5SYE7 1610 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
USP35-204ENST00000530267 CAVIN1Q6NZI2 390 aaKnown RBP18.22■□□□□ 0.51
USP35-204ENST00000530267 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 PDRG1Q9NUG6 133 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 LIMCH1Q9UPQ0 1083 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 TNS2Q63HR2 1409 aa18.22■□□□□ 0.51
USP35-204ENST00000530267 BRD1O95696 1058 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 GRPEL1Q9HAV7 217 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 CCDC129Q6ZRS4 1044 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 MAP4K1Q92918 833 aa18.21■□□□□ 0.51
USP35-204ENST00000530267 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
USP35-204ENST00000530267 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
USP35-204ENST00000530267 COL15A1P39059 1388 aa18.2■□□□□ 0.5
USP35-204ENST00000530267 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
USP35-204ENST00000530267 SLC27A2O14975 620 aa18.2■□□□□ 0.5
USP35-204ENST00000530267 MRE11P49959 708 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 290.9 ms