RNA–Protein interactions for RNA: ENST00000530219.1

EIF3F-204, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 2,110 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-204ENST00000530219 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
EIF3F-204ENST00000530219 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
EIF3F-204ENST00000530219 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.323e-14■□□□□ 10.7
EIF3F-204ENST00000530219 CHMLP26374 656 aa13.05□□□□□ -0.32
EIF3F-204ENST00000530219 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
EIF3F-204ENST00000530219 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
EIF3F-204ENST00000530219 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 PIBF1Q8WXW3 757 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 ANO2Q9NQ90 1003 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
EIF3F-204ENST00000530219 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 GTF2F1P35269 517 aaKnown RBP eCLIP13.03□□□□□ -0.32
EIF3F-204ENST00000530219 UBE2HP62256 183 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
EIF3F-204ENST00000530219 GOLGA6L6A8MZA4 724 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 APBB1O00213 710 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 HSPA4P34932 840 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
EIF3F-204ENST00000530219 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
EIF3F-204ENST00000530219 PNPLA7Q6ZV29 1317 aa13.03□□□□□ -0.32
EIF3F-204ENST00000530219 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
EIF3F-204ENST00000530219 FBLN1P23142 703 aa13.02□□□□□ -0.33
EIF3F-204ENST00000530219 TSPYL4Q9UJ04 414 aa13.02□□□□□ -0.33
EIF3F-204ENST00000530219 ADCY9O60503 1353 aa13.02□□□□□ -0.33
EIF3F-204ENST00000530219 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
EIF3F-204ENST00000530219 RBM10P98175 930 aaKnown RBP13.01□□□□□ -0.33
EIF3F-204ENST00000530219 CHAF1AQ13111 956 aaPredicted RBP13.01□□□□□ -0.33
EIF3F-204ENST00000530219 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
EIF3F-204ENST00000530219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.333e-11■■■■□ 21.3
EIF3F-204ENST00000530219 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 RNF214Q8ND24 703 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 DIAPH3Q9NSV4 1193 aa13.01□□□□□ -0.33
EIF3F-204ENST00000530219 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 USP48Q86UV5 1035 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 RILPL2Q969X0 211 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 USP25Q9UHP3 1055 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
EIF3F-204ENST00000530219 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
EIF3F-204ENST00000530219 MCM10Q7L590 875 aa13□□□□□ -0.33
EIF3F-204ENST00000530219 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
EIF3F-204ENST00000530219 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
EIF3F-204ENST00000530219 KDRP35968 1356 aa12.99□□□□□ -0.33
EIF3F-204ENST00000530219 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
EIF3F-204ENST00000530219 RAD50Q92878 1312 aa12.99□□□□□ -0.33
EIF3F-204ENST00000530219 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
EIF3F-204ENST00000530219 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
EIF3F-204ENST00000530219 FAM208AQ9UK61 1670 aaKnown RBP12.98□□□□□ -0.33
EIF3F-204ENST00000530219 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
EIF3F-204ENST00000530219 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 FLIIQ13045 1269 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
EIF3F-204ENST00000530219 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 NFAT5O94916 1531 aa12.98□□□□□ -0.33
EIF3F-204ENST00000530219 FLT4P35916 1363 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 STX6O43752 255 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 KDM4AO75164 1064 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
EIF3F-204ENST00000530219 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 ADCY5O95622 1261 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
EIF3F-204ENST00000530219 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 SSH3Q8TE77 659 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
EIF3F-204ENST00000530219 SGSM2O43147 1006 aa12.96□□□□□ -0.33
EIF3F-204ENST00000530219 IL2RBP14784 551 aa12.96□□□□□ -0.33
EIF3F-204ENST00000530219 FOXD4L5Q5VV16 416 aaPredicted RBP12.96□□□□□ -0.33
EIF3F-204ENST00000530219 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.33
EIF3F-204ENST00000530219 KIF1BPQ96EK5 621 aa12.96□□□□□ -0.33
EIF3F-204ENST00000530219 TM6SF1Q9BZW5 370 aa12.96□□□□□ -0.33
EIF3F-204ENST00000530219 TTC41PQ6P2S7 1318 aa12.96□□□□□ -0.34
EIF3F-204ENST00000530219 F13A1P00488 732 aa12.95□□□□□ -0.34
EIF3F-204ENST00000530219 APLP1P51693 650 aa12.95□□□□□ -0.34
EIF3F-204ENST00000530219 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
EIF3F-204ENST00000530219 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
EIF3F-204ENST00000530219 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 PDCP20941 246 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 TTC14Q96N46 770 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 LY75O60449 1722 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
EIF3F-204ENST00000530219 F6X3S4 739 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 KIF3CO14782 793 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 SOX12O15370 315 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
EIF3F-204ENST00000530219 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 G2E3Q7L622 706 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 DNAJC5GQ8N7S2 189 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms