RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
PACS1-210ENST00000529795 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
PACS1-210ENST00000529795 LTBP3Q9NS15 1303 aa16.4■□□□□ 0.22
PACS1-210ENST00000529795 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
PACS1-210ENST00000529795 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
PACS1-210ENST00000529795 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
PACS1-210ENST00000529795 NTSR2O95665 410 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
PACS1-210ENST00000529795 UBN2Q6ZU65 1347 aa16.39■□□□□ 0.21
PACS1-210ENST00000529795 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
PACS1-210ENST00000529795 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
PACS1-210ENST00000529795 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
PACS1-210ENST00000529795 RIC3Q7Z5B4 369 aa16.38■□□□□ 0.21
PACS1-210ENST00000529795 ZNF526Q8TF50 670 aaPredicted RBP16.38■□□□□ 0.21
PACS1-210ENST00000529795 TAOK3Q9H2K8 898 aa16.38■□□□□ 0.21
PACS1-210ENST00000529795 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
PACS1-210ENST00000529795 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
PACS1-210ENST00000529795 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
PACS1-210ENST00000529795 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
PACS1-210ENST00000529795 CRAMP1Q96RY5 1269 aa16.37■□□□□ 0.21
PACS1-210ENST00000529795 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
PACS1-210ENST00000529795 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PACS1-210ENST00000529795 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
PACS1-210ENST00000529795 TRIM28Q13263 835 aaKnown RBP16.36■□□□□ 0.21
PACS1-210ENST00000529795 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
PACS1-210ENST00000529795 NFKBIEO00221 500 aa16.35■□□□□ 0.21
PACS1-210ENST00000529795 RASSF7Q02833 373 aa16.35■□□□□ 0.21
PACS1-210ENST00000529795 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
PACS1-210ENST00000529795 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
PACS1-210ENST00000529795 C7orf43Q8WVR3 580 aa16.34■□□□□ 0.21
PACS1-210ENST00000529795 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
PACS1-210ENST00000529795 ABCC12Q96J65 1359 aa16.34■□□□□ 0.21
PACS1-210ENST00000529795 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
PACS1-210ENST00000529795 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
PACS1-210ENST00000529795 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
PACS1-210ENST00000529795 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
PACS1-210ENST00000529795 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
PACS1-210ENST00000529795 BBOX1O75936 387 aa16.32■□□□□ 0.2
PACS1-210ENST00000529795 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
PACS1-210ENST00000529795 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
PACS1-210ENST00000529795 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
PACS1-210ENST00000529795 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
PACS1-210ENST00000529795 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
PACS1-210ENST00000529795 TOMM70O94826 608 aa16.31■□□□□ 0.2
PACS1-210ENST00000529795 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
PACS1-210ENST00000529795 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
PACS1-210ENST00000529795 PSMD1Q99460 953 aa16.31■□□□□ 0.2
PACS1-210ENST00000529795 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
PACS1-210ENST00000529795 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
PACS1-210ENST00000529795 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
PACS1-210ENST00000529795 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
PACS1-210ENST00000529795 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
PACS1-210ENST00000529795 VPS33BQ9H267 617 aa16.3■□□□□ 0.2
PACS1-210ENST00000529795 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
PACS1-210ENST00000529795 KIF3CO14782 793 aa16.29■□□□□ 0.2
PACS1-210ENST00000529795 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
PACS1-210ENST00000529795 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
PACS1-210ENST00000529795 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
PACS1-210ENST00000529795 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
PACS1-210ENST00000529795 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
PACS1-210ENST00000529795 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
PACS1-210ENST00000529795 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
PACS1-210ENST00000529795 FAM89AQ96GI7 184 aa16.28■□□□□ 0.2
PACS1-210ENST00000529795 MYD88Q99836 296 aa16.28■□□□□ 0.2
PACS1-210ENST00000529795 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
PACS1-210ENST00000529795 LAMB2P55268 1798 aa16.28■□□□□ 0.2
PACS1-210ENST00000529795 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 VAMP4O75379 141 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 PCCAP05165 728 aaPredicted RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 EXOSC9Q06265 439 aaKnown RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 GRAPQ13588 217 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
PACS1-210ENST00000529795 RRAGCQ9HB90 399 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
PACS1-210ENST00000529795 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
PACS1-210ENST00000529795 ABCC4O15439 1325 aa16.25■□□□□ 0.19
PACS1-210ENST00000529795 E9PSI1 815 aa16.25■□□□□ 0.19
PACS1-210ENST00000529795 PRELPP51888 382 aa16.25■□□□□ 0.19
PACS1-210ENST00000529795 FLIIQ13045 1269 aa16.25■□□□□ 0.19
PACS1-210ENST00000529795 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
PACS1-210ENST00000529795 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
PACS1-210ENST00000529795 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
PACS1-210ENST00000529795 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
PACS1-210ENST00000529795 PDE8AO60658 829 aa16.24■□□□□ 0.19
PACS1-210ENST00000529795 FSTL1Q12841 308 aa16.24■□□□□ 0.19
PACS1-210ENST00000529795 WDR90Q96KV7 1748 aa16.23■□□□□ 0.19
PACS1-210ENST00000529795 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms