RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ABCC12Q96J65 1359 aa20.03■□□□□ 0.8
CCDC90B-215ENST00000529745 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 NPR1P16066 1061 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 SUSD4Q5VX71 490 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 PPP1R42Q7Z4L9 355 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.8
CCDC90B-215ENST00000529745 GPTP24298 496 aa20.01■□□□□ 0.79
CCDC90B-215ENST00000529745 FSTL1Q12841 308 aa20.01■□□□□ 0.79
CCDC90B-215ENST00000529745 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
CCDC90B-215ENST00000529745 PLBD2Q8NHP8 589 aa20.01■□□□□ 0.79
CCDC90B-215ENST00000529745 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
CCDC90B-215ENST00000529745 TCIRG1Q13488 830 aa20■□□□□ 0.79
CCDC90B-215ENST00000529745 LTBP3Q9NS15 1303 aa20■□□□□ 0.79
CCDC90B-215ENST00000529745 DDX60Q8IY21 1712 aaKnown RBP19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 FAM177BA6PVY3 158 aa19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 AIMP1Q12904 312 aaKnown RBP19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 ERFEQ4G0M1 354 aa19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 SLC10A5Q5PT55 438 aa19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
CCDC90B-215ENST00000529745 NFKBIEO00221 500 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 SOGA3Q5TF21 947 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 C9orf131Q5VYM1 1079 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 PRPF40BQ6NWY9 871 aaKnown RBP19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 NLRP10Q86W26 655 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 C7orf43Q8WVR3 580 aa19.98■□□□□ 0.79
CCDC90B-215ENST00000529745 HOXA10P31260 410 aaPredicted RBP19.97■□□□□ 0.79
CCDC90B-215ENST00000529745 CCDC30Q5VVM6 783 aa19.97■□□□□ 0.79
CCDC90B-215ENST00000529745 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
CCDC90B-215ENST00000529745 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
CCDC90B-215ENST00000529745 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 HSPA1AP0DMV8 641 aaKnown RBP19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 HSPA1BP0DMV9 641 aaKnown RBP19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 LMNB1P20700 586 aa19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 ALDH1B1P30837 517 aa19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 TRIM28Q13263 835 aaKnown RBP19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 ISCA1Q9BUE6 129 aa19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
CCDC90B-215ENST00000529745 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
CCDC90B-215ENST00000529745 C21orf2O43822 256 aa19.95■□□□□ 0.78
CCDC90B-215ENST00000529745 RASSF7Q02833 373 aa19.95■□□□□ 0.78
CCDC90B-215ENST00000529745 RNF181Q9P0P0 153 aa19.95■□□□□ 0.78
CCDC90B-215ENST00000529745 FANCIQ9NVI1 1328 aa19.95■□□□□ 0.78
CCDC90B-215ENST00000529745 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-215ENST00000529745 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
CCDC90B-215ENST00000529745 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
CCDC90B-215ENST00000529745 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
CCDC90B-215ENST00000529745 CRAMP1Q96RY5 1269 aa19.93■□□□□ 0.78
CCDC90B-215ENST00000529745 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
CCDC90B-215ENST00000529745 CCDC93Q567U6 631 aa19.92■□□□□ 0.78
CCDC90B-215ENST00000529745 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
CCDC90B-215ENST00000529745 SH3TC1Q8TE82 1336 aa19.91■□□□□ 0.78
CCDC90B-215ENST00000529745 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
CCDC90B-215ENST00000529745 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
CCDC90B-215ENST00000529745 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
CCDC90B-215ENST00000529745 PCDH10Q9P2E7 1040 aa19.9■□□□□ 0.78
CCDC90B-215ENST00000529745 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
CCDC90B-215ENST00000529745 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 DDX58O95786 925 aaKnown RBP19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 GRIPAP1Q4V328 841 aa19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 C3orf67Q6ZVT6 689 aa19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 RBM17Q96I25 401 aaKnown RBP19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 STK31Q9BXU1 1019 aa19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 SALL2Q9Y467 1007 aaPredicted RBP19.89■□□□□ 0.77
CCDC90B-215ENST00000529745 VAMP4O75379 141 aa19.88■□□□□ 0.77
CCDC90B-215ENST00000529745 RTKN2Q8IZC4 609 aa19.88■□□□□ 0.77
CCDC90B-215ENST00000529745 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
CCDC90B-215ENST00000529745 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
CCDC90B-215ENST00000529745 KDM2BQ8NHM5 1336 aa19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 MYH3P11055 1940 aa19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 FKBP4Q02790 459 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 CCDC191Q8NCU4 936 aa19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 METTL22Q9BUU2 404 aaPredicted RBP19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 TAF1P21675 1872 aa19.87■□□□□ 0.77
CCDC90B-215ENST00000529745 ATP5J2-PTCD1G3V325 749 aa19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 EXOSC9Q06265 439 aaKnown RBP19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 KSR2Q6VAB6 950 aa19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 SYNE4Q8N205 404 aa19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 SMC1BQ8NDV3 1235 aa19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 PSMD1Q99460 953 aa19.86■□□□□ 0.77
CCDC90B-215ENST00000529745 RRAGCQ9HB90 399 aa19.85■□□□□ 0.77
CCDC90B-215ENST00000529745 ABCC4O15439 1325 aa19.84■□□□□ 0.77
CCDC90B-215ENST00000529745 GLTPD2A6NH11 291 aa19.84■□□□□ 0.77
CCDC90B-215ENST00000529745 HCLS1P14317 486 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-215ENST00000529745 SF3B3Q15393 1217 aaKnown RBP19.84■□□□□ 0.77
CCDC90B-215ENST00000529745 ZBTB38Q8NAP3 1195 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-215ENST00000529745 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
CCDC90B-215ENST00000529745 SLC4A2P04920 1241 aa19.83■□□□□ 0.77
CCDC90B-215ENST00000529745 FAM89AQ96GI7 184 aa19.83■□□□□ 0.77
CCDC90B-215ENST00000529745 MYD88Q99836 296 aa19.83■□□□□ 0.77
CCDC90B-215ENST00000529745 MAP3K2Q9Y2U5 619 aa19.83■□□□□ 0.77
CCDC90B-215ENST00000529745 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
CCDC90B-215ENST00000529745 BBOX1O75936 387 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms