RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 POLR3GO15318 223 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 ZSCAN23Q3MJ62 389 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 IQSEC3Q9UPP2 1182 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 FANCAO15360 1455 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 IDEP14735 1019 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 SLC39A6Q13433 755 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 C16orf71Q8IYS4 520 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 CNPY2Q9Y2B0 182 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 FGFR1OPO95684 399 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 SNRPA1P09661 255 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 TCERG1LQ5VWI1 586 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 CALML4Q96GE6 196 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 EZRP15311 586 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 CCDC40Q4G0X9 1142 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 VPS36Q86VN1 386 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 SLF2Q8IX21 1173 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 CDC5LQ99459 802 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 MMRN2Q9H8L6 949 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 USP8P40818 1118 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 HSP90AA4PQ58FG1 418 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 BRF1Q92994 677 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 KLF18A0A0U1RQI7 1052 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 USO1O60763 962 aaKnown RBP9.37□□□□□ -0.91
CTNND1-220ENST00000529526 PDE4BQ07343 736 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
CTNND1-220ENST00000529526 CETN2P41208 172 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 IFFO1Q0D2I5 559 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 DHX29Q7Z478 1369 aaKnown RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 C8orf58Q8NAV2 365 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ZNF830Q96NB3 372 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 TNNQ9UQP3 1299 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 KIF5BP33176 963 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.913e-7■□□□□ 10.1
CTNND1-220ENST00000529526 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ANAPC15P60006 121 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 UBE2HP62256 183 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 TMCO5BA8MYB1 307 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ZSCAN22P10073 491 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 TRIM21P19474 475 aaKnown RBP9.36□□□□□ -0.91
CTNND1-220ENST00000529526 AFMP43652 599 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 ZNF165P49910 485 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 FEZ1Q99689 392 aa9.36□□□□□ -0.91
CTNND1-220ENST00000529526 IL16Q14005 1332 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 MAP9Q49MG5 647 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 EHMT1Q9H9B1 1298 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 HMG20BQ9P0W2 317 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 SAMM50Q9Y512 469 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 RFC4P35249 363 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 MRPL50Q8N5N7 158 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 ZSWIM4Q9H7M6 989 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 PA2G4Q9UQ80 394 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 F8W031 263 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 MCM5P33992 734 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 PRPF4BQ13523 1007 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 PKNOX2Q96KN3 472 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 TEX13AQ9BXU3 409 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 DENND4BO75064 1496 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 BAG3O95817 575 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 CCDC150Q8NCX0 1101 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 DNAJC5BQ9UF47 199 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 RBM8AQ9Y5S9 174 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 AMPD3Q01432 767 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 SNW1Q13573 536 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 WTAPQ15007 396 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 Q6ZUG5 572 aa9.35□□□□□ -0.91
CTNND1-220ENST00000529526 CCDC12Q8WUD4 166 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 CGNQ9P2M7 1197 aaKnown RBP9.35□□□□□ -0.91
CTNND1-220ENST00000529526 CYP7A1P22680 504 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 PAFAH1B1P43034 410 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 PDE1AP54750 535 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 HDAC1Q13547 482 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-220ENST00000529526 SYCP3Q8IZU3 236 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 ASXL1Q8IXJ9 1541 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 GSDMDP57764 484 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 NBPF6Q5VWK0 638 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 NBPF5PQ86XG9 351 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-220ENST00000529526 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 PRC1O43663 620 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 UBA7P41226 1012 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
CTNND1-220ENST00000529526 USP48Q86UV5 1035 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms