RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 PXDNLA1KZ92 1463 aa14.48□□□□□ -0.09
CHD7-209ENST00000529472 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
CHD7-209ENST00000529472 NTSR2O95665 410 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 GTF2E1P29083 439 aaPredicted RBP14.47□□□□□ -0.09
CHD7-209ENST00000529472 BEND3Q5T5X7 828 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 PRR5LQ6MZQ0 368 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 LINS1Q8NG48 757 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 CLUAP1Q96AJ1 413 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 NYXQ9GZU5 481 aa14.47□□□□□ -0.09
CHD7-209ENST00000529472 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
CHD7-209ENST00000529472 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
CHD7-209ENST00000529472 PLIN1O60240 522 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 ST5P78524 1137 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
CHD7-209ENST00000529472 ERFEQ4G0M1 354 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
CHD7-209ENST00000529472 TPTE2Q6XPS3 522 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 SRCIN1Q9C0H9 1055 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.09
CHD7-209ENST00000529472 ABCC12Q96J65 1359 aa14.46□□□□□ -0.1
CHD7-209ENST00000529472 ABCC4O15439 1325 aa14.45□□□□□ -0.1
CHD7-209ENST00000529472 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
CHD7-209ENST00000529472 SYNE4Q8N205 404 aa14.45□□□□□ -0.1
CHD7-209ENST00000529472 JARID2Q92833 1246 aaPredicted RBP14.45□□□□□ -0.1
CHD7-209ENST00000529472 FAM89AQ96GI7 184 aa14.45□□□□□ -0.1
CHD7-209ENST00000529472 KIF13BQ9NQT8 1826 aa14.45□□□□□ -0.1
CHD7-209ENST00000529472 SH3TC1Q8TE82 1336 aa14.44□□□□□ -0.1
CHD7-209ENST00000529472 ANKRD31Q8N7Z5 1873 aa14.44□□□□□ -0.1
CHD7-209ENST00000529472 CCT4P50991 539 aaKnown RBP14.44□□□□□ -0.1
CHD7-209ENST00000529472 GCKRQ14397 625 aa14.44□□□□□ -0.1
CHD7-209ENST00000529472 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
CHD7-209ENST00000529472 TNRC6CQ9HCJ0 1690 aaKnown RBP14.44□□□□□ -0.1
CHD7-209ENST00000529472 ALDH1L1O75891 902 aa14.43□□□□□ -0.1
CHD7-209ENST00000529472 UBE3BQ7Z3V4 1068 aa14.43□□□□□ -0.1
CHD7-209ENST00000529472 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
CHD7-209ENST00000529472 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.43□□□□□ -0.1
CHD7-209ENST00000529472 ZBTB38Q8NAP3 1195 aaPredicted RBP14.43□□□□□ -0.1
CHD7-209ENST00000529472 DDX60Q8IY21 1712 aaKnown RBP14.43□□□□□ -0.1
CHD7-209ENST00000529472 UTRNP46939 3433 aa14.43□□□□□ -0.1
CHD7-209ENST00000529472 RNF123Q5XPI4 1314 aa14.42□□□□□ -0.1
CHD7-209ENST00000529472 LAMB2P55268 1798 aa14.42□□□□□ -0.1
CHD7-209ENST00000529472 PCCAP05165 728 aaPredicted RBP14.42□□□□□ -0.1
CHD7-209ENST00000529472 RLBP1P12271 317 aa14.42□□□□□ -0.1
CHD7-209ENST00000529472 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
CHD7-209ENST00000529472 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
CHD7-209ENST00000529472 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
CHD7-209ENST00000529472 C9orf78Q9NZ63 289 aaPredicted RBP14.42□□□□□ -0.1
CHD7-209ENST00000529472 COL11A2P13942 1736 aaPredicted RBP14.41□□□□□ -0.1
CHD7-209ENST00000529472 GRM8O00222 908 aa14.41□□□□□ -0.1
CHD7-209ENST00000529472 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
CHD7-209ENST00000529472 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
CHD7-209ENST00000529472 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
CHD7-209ENST00000529472 CD2APQ9Y5K6 639 aa14.41□□□□□ -0.1
CHD7-209ENST00000529472 INTS3Q68E01 1043 aaKnown RBP14.4□□□□□ -0.1
CHD7-209ENST00000529472 C3orf67Q6ZVT6 689 aa14.4□□□□□ -0.1
CHD7-209ENST00000529472 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.1
CHD7-209ENST00000529472 NLGN2Q8NFZ4 835 aa14.4□□□□□ -0.1
CHD7-209ENST00000529472 KIAA1551Q9HCM1 1747 aa14.4□□□□□ -0.1
CHD7-209ENST00000529472 RIC1Q4ADV7 1423 aa14.4□□□□□ -0.1
CHD7-209ENST00000529472 H7C1W4 665 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 MS4A1P11836 297 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 CHRNA5P30532 468 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 PDE6BP35913 854 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 C20orf194Q5TEA3 1177 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 C2CD5Q86YS7 1000 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 CDHR2Q9BYE9 1310 aa14.39□□□□□ -0.11
CHD7-209ENST00000529472 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 NBPF7P0C2Y1 421 aaPredicted RBP14.38□□□□□ -0.11
CHD7-209ENST00000529472 DPEP1P16444 411 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 CASP7P55210 303 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 SLC10A5Q5PT55 438 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 NLRP3Q96P20 1036 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 SYT17Q9BSW7 474 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 USP44Q9H0E7 712 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 MYH3P11055 1940 aa14.38□□□□□ -0.11
CHD7-209ENST00000529472 DLEC1Q9Y238 1755 aa14.37□□□□□ -0.11
CHD7-209ENST00000529472 H0YIN7 160 aa14.37□□□□□ -0.11
CHD7-209ENST00000529472 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
CHD7-209ENST00000529472 TGFB2P61812 414 aa14.37□□□□□ -0.11
CHD7-209ENST00000529472 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
CHD7-209ENST00000529472 MEIS3Q99687 375 aa14.37□□□□□ -0.11
CHD7-209ENST00000529472 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
CHD7-209ENST00000529472 CACNA1SQ13698 1873 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 PDE8AO60658 829 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
CHD7-209ENST00000529472 CTSWP56202 376 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 PDE3AQ14432 1141 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHD7-209ENST00000529472 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 CCDC85AQ96PX6 553 aaPredicted RBP14.36□□□□□ -0.11
CHD7-209ENST00000529472 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 UTYO14607 1347 aa14.36□□□□□ -0.11
CHD7-209ENST00000529472 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
CHD7-209ENST00000529472 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
CHD7-209ENST00000529472 SRGNP10124 158 aa14.35□□□□□ -0.11
CHD7-209ENST00000529472 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
CHD7-209ENST00000529472 CRY2Q49AN0 593 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms