RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 GLTPD2A6NH11 291 aa18.05■□□□□ 0.48
CHRDL2-205ENST00000528471 ANP32CO43423 234 aa18.05■□□□□ 0.48
CHRDL2-205ENST00000528471 GNAI1P63096 354 aa18.05■□□□□ 0.48
CHRDL2-205ENST00000528471 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
CHRDL2-205ENST00000528471 WDR90Q96KV7 1748 aa18.05■□□□□ 0.48
CHRDL2-205ENST00000528471 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 DPY19L2Q6NUT2 758 aa18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 RBM46Q8TBY0 533 aaKnown RBP18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 C7orf43Q8WVR3 580 aa18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 UTP14AQ9BVJ6 771 aaKnown RBP18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
CHRDL2-205ENST00000528471 RTKN2Q8IZC4 609 aa18.03■□□□□ 0.48
CHRDL2-205ENST00000528471 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
CHRDL2-205ENST00000528471 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
CHRDL2-205ENST00000528471 ZNF853P0CG23 659 aa18.02■□□□□ 0.48
CHRDL2-205ENST00000528471 VEGFAP15692 232 aaPredicted RBP18.02■□□□□ 0.48
CHRDL2-205ENST00000528471 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.48
CHRDL2-205ENST00000528471 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
CHRDL2-205ENST00000528471 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
CHRDL2-205ENST00000528471 NLRP3Q96P20 1036 aa18.01■□□□□ 0.47
CHRDL2-205ENST00000528471 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
CHRDL2-205ENST00000528471 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
CHRDL2-205ENST00000528471 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
CHRDL2-205ENST00000528471 TCIRG1Q13488 830 aa18■□□□□ 0.47
CHRDL2-205ENST00000528471 NLRP10Q86W26 655 aa18■□□□□ 0.47
CHRDL2-205ENST00000528471 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
CHRDL2-205ENST00000528471 ZNF277Q9NRM2 450 aaPredicted RBP18■□□□□ 0.47
CHRDL2-205ENST00000528471 SCN4AP35499 1836 aa18■□□□□ 0.47
CHRDL2-205ENST00000528471 APLP1P51693 650 aa17.99■□□□□ 0.47
CHRDL2-205ENST00000528471 FSTL1Q12841 308 aa17.99■□□□□ 0.47
CHRDL2-205ENST00000528471 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
CHRDL2-205ENST00000528471 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
CHRDL2-205ENST00000528471 TAF1P21675 1872 aa17.99■□□□□ 0.47
CHRDL2-205ENST00000528471 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 PPEF1O14829 653 aaPredicted RBP17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 ANKRD13DQ6ZTN6 518 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 CRAMP1Q96RY5 1269 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 SLC10A5Q5PT55 438 aa17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
CHRDL2-205ENST00000528471 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
CHRDL2-205ENST00000528471 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
CHRDL2-205ENST00000528471 GRIPAP1Q4V328 841 aa17.97■□□□□ 0.47
CHRDL2-205ENST00000528471 SYNE4Q8N205 404 aa17.97■□□□□ 0.47
CHRDL2-205ENST00000528471 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
CHRDL2-205ENST00000528471 SNED1Q8TER0 1413 aa17.96■□□□□ 0.47
CHRDL2-205ENST00000528471 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.46
CHRDL2-205ENST00000528471 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.46
CHRDL2-205ENST00000528471 CCDC27Q2M243 656 aa17.96■□□□□ 0.46
CHRDL2-205ENST00000528471 ZNF428Q96B54 188 aa17.96■□□□□ 0.46
CHRDL2-205ENST00000528471 PSMD1Q99460 953 aa17.96■□□□□ 0.46
CHRDL2-205ENST00000528471 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
CHRDL2-205ENST00000528471 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
CHRDL2-205ENST00000528471 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
CHRDL2-205ENST00000528471 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
CHRDL2-205ENST00000528471 ABCC4O15439 1325 aa17.95■□□□□ 0.46
CHRDL2-205ENST00000528471 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
CHRDL2-205ENST00000528471 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
CHRDL2-205ENST00000528471 JDP2Q8WYK2 163 aa17.94■□□□□ 0.46
CHRDL2-205ENST00000528471 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
CHRDL2-205ENST00000528471 ISCA1Q9BUE6 129 aa17.94■□□□□ 0.46
CHRDL2-205ENST00000528471 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
CHRDL2-205ENST00000528471 DDX46Q7L014 1031 aaKnown RBP17.93■□□□□ 0.46
CHRDL2-205ENST00000528471 PHAXQ9H814 394 aaKnown RBP17.93■□□□□ 0.46
CHRDL2-205ENST00000528471 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
CHRDL2-205ENST00000528471 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
CHRDL2-205ENST00000528471 POTECB2RU33 542 aa17.92■□□□□ 0.46
CHRDL2-205ENST00000528471 ATP6V0A2Q9Y487 856 aa17.92■□□□□ 0.46
CHRDL2-205ENST00000528471 IL16Q14005 1332 aa17.91■□□□□ 0.46
CHRDL2-205ENST00000528471 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
CHRDL2-205ENST00000528471 LARGE2Q8N3Y3 721 aa17.91■□□□□ 0.46
CHRDL2-205ENST00000528471 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
CHRDL2-205ENST00000528471 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
CHRDL2-205ENST00000528471 MYH3P11055 1940 aa17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 COL4A5P29400 1685 aa17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 BBOX1O75936 387 aa17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 L3MBTL3Q96JM7 780 aaPredicted RBP17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
CHRDL2-205ENST00000528471 FZD9O00144 591 aa17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 EIF6P56537 245 aaKnown RBP17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 TRIM28Q13263 835 aaKnown RBP17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 GRAPQ13588 217 aa17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 MYD88Q99836 296 aa17.89■□□□□ 0.45
CHRDL2-205ENST00000528471 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
CHRDL2-205ENST00000528471 TWISTNBQ3B726 338 aaPredicted RBP17.88■□□□□ 0.45
CHRDL2-205ENST00000528471 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
CHRDL2-205ENST00000528471 NIM1KQ8IY84 436 aa17.88■□□□□ 0.45
CHRDL2-205ENST00000528471 SUPT20HQ8NEM7 779 aa17.88■□□□□ 0.45
CHRDL2-205ENST00000528471 IRS4O14654 1257 aaPredicted RBP17.87■□□□□ 0.45
CHRDL2-205ENST00000528471 HSP90B1P14625 803 aaKnown RBP17.87■□□□□ 0.45
CHRDL2-205ENST00000528471 HTRA3P83110 453 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms