RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
CMTM1-210ENST00000528441 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
CMTM1-210ENST00000528441 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
CMTM1-210ENST00000528441 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
CMTM1-210ENST00000528441 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
CMTM1-210ENST00000528441 DDX21Q9NR30 783 aaKnown RBP eCLIP11.73□□□□□ -0.53
CMTM1-210ENST00000528441 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 TCERG1O14776 1098 aaKnown RBP11.72□□□□□ -0.53
CMTM1-210ENST00000528441 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 ERFEQ4G0M1 354 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 PARP10Q53GL7 1025 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 SOGA3Q5TF21 947 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
CMTM1-210ENST00000528441 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
CMTM1-210ENST00000528441 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
CMTM1-210ENST00000528441 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
CMTM1-210ENST00000528441 RGL2O15211 777 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 HOXB7P09629 217 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 SRGNP10124 158 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 LMNB1P20700 586 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 ALDH1B1P30837 517 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 CCDC93Q567U6 631 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 SUSD4Q5VX71 490 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.53
CMTM1-210ENST00000528441 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.54
CMTM1-210ENST00000528441 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
CMTM1-210ENST00000528441 ADCY9O60503 1353 aa11.7□□□□□ -0.54
CMTM1-210ENST00000528441 ABCC12Q96J65 1359 aa11.7□□□□□ -0.54
CMTM1-210ENST00000528441 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
CMTM1-210ENST00000528441 RBM17Q96I25 401 aaKnown RBP11.7□□□□□ -0.54
CMTM1-210ENST00000528441 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
CMTM1-210ENST00000528441 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
CMTM1-210ENST00000528441 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
CMTM1-210ENST00000528441 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
CMTM1-210ENST00000528441 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
CMTM1-210ENST00000528441 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
CMTM1-210ENST00000528441 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
CMTM1-210ENST00000528441 SLX4Q8IY92 1834 aa11.68□□□□□ -0.54
CMTM1-210ENST00000528441 PDIA6Q15084 440 aa11.68□□□□□ -0.54
CMTM1-210ENST00000528441 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-210ENST00000528441 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
CMTM1-210ENST00000528441 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
CMTM1-210ENST00000528441 TIAM2Q8IVF5 1701 aa11.68□□□□□ -0.54
CMTM1-210ENST00000528441 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
CMTM1-210ENST00000528441 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 NTSR2O95665 410 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 TCIRG1Q13488 830 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 SBF1O95248 1867 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
CMTM1-210ENST00000528441 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-210ENST00000528441 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 NFKBIEO00221 500 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-210ENST00000528441 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-210ENST00000528441 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-210ENST00000528441 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
CMTM1-210ENST00000528441 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 MYD88Q99836 296 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 RRAGCQ9HB90 399 aa11.66□□□□□ -0.54
CMTM1-210ENST00000528441 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
CMTM1-210ENST00000528441 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
CMTM1-210ENST00000528441 NEXNQ0ZGT2 675 aa11.65□□□□□ -0.54
CMTM1-210ENST00000528441 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
CMTM1-210ENST00000528441 PHAXQ9H814 394 aaKnown RBP11.65□□□□□ -0.54
CMTM1-210ENST00000528441 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
CMTM1-210ENST00000528441 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
CMTM1-210ENST00000528441 ZC3H4Q9UPT8 1303 aaKnown RBP11.64□□□□□ -0.55
CMTM1-210ENST00000528441 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
CMTM1-210ENST00000528441 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
CMTM1-210ENST00000528441 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
CMTM1-210ENST00000528441 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
CMTM1-210ENST00000528441 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 KIF3CO14782 793 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
CMTM1-210ENST00000528441 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
CMTM1-210ENST00000528441 IL16Q14005 1332 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 GLTPD2A6NH11 291 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 TOMM70O94826 608 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
CMTM1-210ENST00000528441 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
CMTM1-210ENST00000528441 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
CMTM1-210ENST00000528441 ABCC4O15439 1325 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 KLRG2A4D1S0 409 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms