RNA–Protein interactions for RNA: ENST00000527440.1

AP001547.1-201, humanhuman

TSL 3 BASIC

Gene AP001547.1, Length 374 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001547.1-201ENST00000527440 DBF4Q9UBU7 674 aaPredicted RBP18.61■□□□□ 0.57
AP001547.1-201ENST00000527440 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
AP001547.1-201ENST00000527440 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
AP001547.1-201ENST00000527440 RBM17Q96I25 401 aaKnown RBP18.6■□□□□ 0.57
AP001547.1-201ENST00000527440 NLRP3Q96P20 1036 aa18.6■□□□□ 0.57
AP001547.1-201ENST00000527440 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
AP001547.1-201ENST00000527440 SBF1O95248 1867 aa18.59■□□□□ 0.57
AP001547.1-201ENST00000527440 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
AP001547.1-201ENST00000527440 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
AP001547.1-201ENST00000527440 ZNF428Q96B54 188 aa18.59■□□□□ 0.57
AP001547.1-201ENST00000527440 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
AP001547.1-201ENST00000527440 APLP1P51693 650 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 FSTL1Q12841 308 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 HYPKQ9NX55 129 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 NUP98P52948 1817 aa18.58■□□□□ 0.56
AP001547.1-201ENST00000527440 TIAM2Q8IVF5 1701 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 CACNA1SQ13698 1873 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 PLBD2Q8NHP8 589 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
AP001547.1-201ENST00000527440 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 PPEF1O14829 653 aaPredicted RBP18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 HOXA10P31260 410 aaPredicted RBP18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
AP001547.1-201ENST00000527440 FER1L6Q2WGJ9 1857 aa18.55■□□□□ 0.56
AP001547.1-201ENST00000527440 DDNO94850 711 aaPredicted RBP18.55■□□□□ 0.56
AP001547.1-201ENST00000527440 CC2D2BQ6DHV5 1058 aa18.55■□□□□ 0.56
AP001547.1-201ENST00000527440 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
AP001547.1-201ENST00000527440 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
AP001547.1-201ENST00000527440 SH3TC1Q8TE82 1336 aa18.54■□□□□ 0.56
AP001547.1-201ENST00000527440 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
AP001547.1-201ENST00000527440 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
AP001547.1-201ENST00000527440 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
AP001547.1-201ENST00000527440 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
AP001547.1-201ENST00000527440 ATP5J2-PTCD1G3V325 749 aa18.53■□□□□ 0.56
AP001547.1-201ENST00000527440 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
AP001547.1-201ENST00000527440 JDP2Q8WYK2 163 aa18.53■□□□□ 0.56
AP001547.1-201ENST00000527440 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
AP001547.1-201ENST00000527440 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
AP001547.1-201ENST00000527440 PSMD1Q99460 953 aa18.52■□□□□ 0.56
AP001547.1-201ENST00000527440 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
AP001547.1-201ENST00000527440 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
AP001547.1-201ENST00000527440 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
AP001547.1-201ENST00000527440 ABCC4O15439 1325 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 IQCA1LA6NCM1 817 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 POTECB2RU33 542 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
AP001547.1-201ENST00000527440 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 HTRA3P83110 453 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 ISCA1Q9BUE6 129 aa18.49■□□□□ 0.55
AP001547.1-201ENST00000527440 DDX58O95786 925 aaKnown RBP18.48■□□□□ 0.55
AP001547.1-201ENST00000527440 EIF6P56537 245 aaKnown RBP18.48■□□□□ 0.55
AP001547.1-201ENST00000527440 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
AP001547.1-201ENST00000527440 ATP6V0A2Q9Y487 856 aa18.48■□□□□ 0.55
AP001547.1-201ENST00000527440 WDR90Q96KV7 1748 aa18.47■□□□□ 0.55
AP001547.1-201ENST00000527440 BBOX1O75936 387 aa18.47■□□□□ 0.55
AP001547.1-201ENST00000527440 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
AP001547.1-201ENST00000527440 MYD88Q99836 296 aa18.47■□□□□ 0.55
AP001547.1-201ENST00000527440 GJA3Q9Y6H8 435 aa18.47■□□□□ 0.55
AP001547.1-201ENST00000527440 FZD9O00144 591 aa18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 PPIP5K2O43314 1243 aa18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 GRAPQ13588 217 aa18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 NIM1KQ8IY84 436 aa18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
AP001547.1-201ENST00000527440 ANKRD36CQ5JPF3 1778 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 DICER1Q9UPY3 1922 aaKnown RBP18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 IRS4O14654 1257 aaPredicted RBP18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 CHADLQ6NUI6 762 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 SUPT20HQ8NEM7 779 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 HACL1Q9UJ83 578 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
AP001547.1-201ENST00000527440 TRIM28Q13263 835 aaKnown RBP18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 AOC3Q16853 763 aa18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 TWISTNBQ3B726 338 aaPredicted RBP18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 GPC2Q8N158 579 aa18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 MPNDQ8N594 471 aa18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
AP001547.1-201ENST00000527440 CLEC11AQ9Y240 323 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms