RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 KCNQ3O43525 872 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 SNRPA1P09661 255 aaKnown RBP13.6□□□□□ -0.23
PDZD3-207ENST00000527308 ECE1P42892 770 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 RGS19P49795 217 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 JDP2Q8WYK2 163 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 TRPM7Q96QT4 1865 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
PDZD3-207ENST00000527308 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
PDZD3-207ENST00000527308 NIP7Q9Y221 180 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDZD3-207ENST00000527308 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
PDZD3-207ENST00000527308 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
PDZD3-207ENST00000527308 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
PDZD3-207ENST00000527308 CRY2Q49AN0 593 aa13.58□□□□□ -0.24
PDZD3-207ENST00000527308 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
PDZD3-207ENST00000527308 OLFM4Q6UX06 510 aa13.58□□□□□ -0.24
PDZD3-207ENST00000527308 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
PDZD3-207ENST00000527308 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
PDZD3-207ENST00000527308 ZNF521Q96K83 1311 aa13.58□□□□□ -0.24
PDZD3-207ENST00000527308 PRAMEF22A3QJZ6 481 aa13.57□□□□□ -0.24
PDZD3-207ENST00000527308 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
PDZD3-207ENST00000527308 LMOD1P29536 600 aaPredicted RBP13.57□□□□□ -0.24
PDZD3-207ENST00000527308 MLLT1Q03111 559 aaPredicted RBP13.57□□□□□ -0.24
PDZD3-207ENST00000527308 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
PDZD3-207ENST00000527308 CAPNS2Q96L46 248 aa13.57□□□□□ -0.24
PDZD3-207ENST00000527308 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 MAP2K2P36507 400 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
PDZD3-207ENST00000527308 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 GPR101Q96P66 508 aaPredicted RBP13.56□□□□□ -0.24
PDZD3-207ENST00000527308 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
PDZD3-207ENST00000527308 NUP98P52948 1817 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 SCNN1DP51172 638 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 HLFQ16534 295 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 GJA3Q9Y6H8 435 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
PDZD3-207ENST00000527308 COL4A5P29400 1685 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 CCDC85CA6NKD9 419 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
PDZD3-207ENST00000527308 PRKAR2BP31323 418 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 EPS15P42566 896 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 CST9Q5W186 159 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
PDZD3-207ENST00000527308 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 VPS33BQ9H267 617 aa13.54□□□□□ -0.24
PDZD3-207ENST00000527308 CA12O43570 354 aa13.53□□□□□ -0.24
PDZD3-207ENST00000527308 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
PDZD3-207ENST00000527308 RRP1P56182 461 aaKnown RBP13.53□□□□□ -0.24
PDZD3-207ENST00000527308 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
PDZD3-207ENST00000527308 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
PDZD3-207ENST00000527308 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
PDZD3-207ENST00000527308 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDZD3-207ENST00000527308 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
PDZD3-207ENST00000527308 TRMT2AQ8IZ69 625 aaKnown RBP13.52□□□□□ -0.25
PDZD3-207ENST00000527308 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
PDZD3-207ENST00000527308 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
PDZD3-207ENST00000527308 CRAMP1Q96RY5 1269 aa13.52□□□□□ -0.25
PDZD3-207ENST00000527308 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.25
PDZD3-207ENST00000527308 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
PDZD3-207ENST00000527308 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
PDZD3-207ENST00000527308 MCM10Q7L590 875 aa13.51□□□□□ -0.25
PDZD3-207ENST00000527308 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
PDZD3-207ENST00000527308 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
PDZD3-207ENST00000527308 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
PDZD3-207ENST00000527308 TRAF5O00463 557 aa13.5□□□□□ -0.25
PDZD3-207ENST00000527308 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
PDZD3-207ENST00000527308 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
PDZD3-207ENST00000527308 NIM1KQ8IY84 436 aa13.5□□□□□ -0.25
PDZD3-207ENST00000527308 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
PDZD3-207ENST00000527308 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
PDZD3-207ENST00000527308 BRPF1P55201 1214 aaPredicted RBP13.49□□□□□ -0.25
PDZD3-207ENST00000527308 GRM1Q13255 1194 aa13.49□□□□□ -0.25
PDZD3-207ENST00000527308 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
PDZD3-207ENST00000527308 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
PDZD3-207ENST00000527308 CDHR2Q9BYE9 1310 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 PPEF1O14829 653 aaPredicted RBP13.48□□□□□ -0.25
PDZD3-207ENST00000527308 AOC2O75106 756 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 DUSP27Q5VZP5 1158 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
PDZD3-207ENST00000527308 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
PDZD3-207ENST00000527308 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 ZC3H15Q8WU90 426 aaKnown RBP13.47□□□□□ -0.25
PDZD3-207ENST00000527308 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
PDZD3-207ENST00000527308 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms