RNA–Protein interactions for RNA: ENST00000527008.1

ZNF408-203, Transcript of zinc finger protein 408, humanhuman

TSL 2

Gene ZNF408, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-203ENST00000527008 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
ZNF408-203ENST00000527008 ZNF521Q96K83 1311 aa13.05□□□□□ -0.32
ZNF408-203ENST00000527008 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
ZNF408-203ENST00000527008 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
ZNF408-203ENST00000527008 ADCY9O60503 1353 aa13.05□□□□□ -0.32
ZNF408-203ENST00000527008 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
ZNF408-203ENST00000527008 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
ZNF408-203ENST00000527008 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
ZNF408-203ENST00000527008 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
ZNF408-203ENST00000527008 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
ZNF408-203ENST00000527008 ARFGEF2Q9Y6D5 1785 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
ZNF408-203ENST00000527008 C21orf2O43822 256 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
ZNF408-203ENST00000527008 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
ZNF408-203ENST00000527008 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
ZNF408-203ENST00000527008 SH3TC1Q8TE82 1336 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
ZNF408-203ENST00000527008 VAMP4O75379 141 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 RASSF7Q02833 373 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
ZNF408-203ENST00000527008 SOGA3Q5TF21 947 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 MIER1Q8N108 512 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
ZNF408-203ENST00000527008 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
ZNF408-203ENST00000527008 SBF1O95248 1867 aa13.01□□□□□ -0.33
ZNF408-203ENST00000527008 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
ZNF408-203ENST00000527008 E9PSI1 815 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 NFKBIEO00221 500 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 LMNB1P20700 586 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
ZNF408-203ENST00000527008 CCDC93Q567U6 631 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 KSR2Q6VAB6 950 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
ZNF408-203ENST00000527008 MYD88Q99836 296 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 METTL22Q9BUU2 404 aaPredicted RBP13□□□□□ -0.33
ZNF408-203ENST00000527008 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
ZNF408-203ENST00000527008 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
ZNF408-203ENST00000527008 FLIIQ13045 1269 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 G2E3Q7L622 706 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
ZNF408-203ENST00000527008 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
ZNF408-203ENST00000527008 NEXNQ0ZGT2 675 aa12.98□□□□□ -0.33
ZNF408-203ENST00000527008 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
ZNF408-203ENST00000527008 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
ZNF408-203ENST00000527008 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
ZNF408-203ENST00000527008 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
ZNF408-203ENST00000527008 PRELPP51888 382 aa12.97□□□□□ -0.33
ZNF408-203ENST00000527008 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
ZNF408-203ENST00000527008 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
ZNF408-203ENST00000527008 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
ZNF408-203ENST00000527008 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
ZNF408-203ENST00000527008 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
ZNF408-203ENST00000527008 LAMB2P55268 1798 aa12.97□□□□□ -0.33
ZNF408-203ENST00000527008 IRS4O14654 1257 aaPredicted RBP12.96□□□□□ -0.33
ZNF408-203ENST00000527008 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
ZNF408-203ENST00000527008 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
ZNF408-203ENST00000527008 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
ZNF408-203ENST00000527008 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
ZNF408-203ENST00000527008 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
ZNF408-203ENST00000527008 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.34
ZNF408-203ENST00000527008 ABCC4O15439 1325 aa12.95□□□□□ -0.34
ZNF408-203ENST00000527008 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
ZNF408-203ENST00000527008 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF408-203ENST00000527008 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
ZNF408-203ENST00000527008 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
ZNF408-203ENST00000527008 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
ZNF408-203ENST00000527008 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
ZNF408-203ENST00000527008 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
ZNF408-203ENST00000527008 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
ZNF408-203ENST00000527008 BBOX1O75936 387 aa12.94□□□□□ -0.34
ZNF408-203ENST00000527008 GRAPQ13588 217 aa12.94□□□□□ -0.34
ZNF408-203ENST00000527008 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
ZNF408-203ENST00000527008 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
ZNF408-203ENST00000527008 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
ZNF408-203ENST00000527008 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
ZNF408-203ENST00000527008 PSMD1Q99460 953 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
ZNF408-203ENST00000527008 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
ZNF408-203ENST00000527008 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms