RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
SNRNP35-203ENST00000526639 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
SNRNP35-203ENST00000526639 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
SNRNP35-203ENST00000526639 NPR1P16066 1061 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 PRELPP51888 382 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 TCIRG1Q13488 830 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 PARP10Q53GL7 1025 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 NFKBIEO00221 500 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 SYNE4Q8N205 404 aa14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 UTP14AQ9BVJ6 771 aaKnown RBP14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
SNRNP35-203ENST00000526639 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 ATP5J2-PTCD1G3V325 749 aa14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 TWISTNBQ3B726 338 aaPredicted RBP14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 CCDC30Q5VVM6 783 aa14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 OLFM4Q6UX06 510 aa14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 IL16Q14005 1332 aa14.35□□□□□ -0.11
SNRNP35-203ENST00000526639 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 TRMT112Q9UI30 125 aaKnown RBP14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
SNRNP35-203ENST00000526639 SBF1O95248 1867 aa14.33□□□□□ -0.11
SNRNP35-203ENST00000526639 LMNB1P20700 586 aa14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 IBTKQ9P2D0 1353 aaPredicted RBP14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 NLRP3Q96P20 1036 aa14.33□□□□□ -0.12
SNRNP35-203ENST00000526639 FAM89AQ96GI7 184 aa14.32□□□□□ -0.12
SNRNP35-203ENST00000526639 ANKRD36CQ5JPF3 1778 aa14.32□□□□□ -0.12
SNRNP35-203ENST00000526639 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 STK31Q9BXU1 1019 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 SH3TC1Q8TE82 1336 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 ISCA1Q9BUE6 129 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
SNRNP35-203ENST00000526639 CCDC88AQ3V6T2 1871 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 SLC10A5Q5PT55 438 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 G2E3Q7L622 706 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 MYD88Q99836 296 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 CHMP4AQ9BY43 222 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 FER1L6Q2WGJ9 1857 aa14.3□□□□□ -0.12
SNRNP35-203ENST00000526639 VAMP4O75379 141 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 HOXA10P31260 410 aaPredicted RBP14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 CCDC93Q567U6 631 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
SNRNP35-203ENST00000526639 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
SNRNP35-203ENST00000526639 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
SNRNP35-203ENST00000526639 JARID2Q92833 1246 aaPredicted RBP14.28□□□□□ -0.12
SNRNP35-203ENST00000526639 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
SNRNP35-203ENST00000526639 KIF3CO14782 793 aa14.27□□□□□ -0.12
SNRNP35-203ENST00000526639 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.12
SNRNP35-203ENST00000526639 METTL22Q9BUU2 404 aaPredicted RBP14.27□□□□□ -0.12
SNRNP35-203ENST00000526639 ZNF277Q9NRM2 450 aaPredicted RBP14.27□□□□□ -0.12
SNRNP35-203ENST00000526639 ZNF521Q96K83 1311 aa14.27□□□□□ -0.13
SNRNP35-203ENST00000526639 TRIM28Q13263 835 aaKnown RBP14.27□□□□□ -0.13
SNRNP35-203ENST00000526639 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
SNRNP35-203ENST00000526639 CRAMP1Q96RY5 1269 aa14.27□□□□□ -0.13
SNRNP35-203ENST00000526639 CEP350Q5VT06 3117 aa14.27□□□□□ -0.13
SNRNP35-203ENST00000526639 ABCC4O15439 1325 aa14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 RRAGCQ9HB90 399 aa14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
SNRNP35-203ENST00000526639 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 FLIIQ13045 1269 aa14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 LAMB2P55268 1798 aa14.25□□□□□ -0.13
SNRNP35-203ENST00000526639 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
SNRNP35-203ENST00000526639 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
SNRNP35-203ENST00000526639 FKBP5Q13451 457 aaPredicted RBP14.24□□□□□ -0.13
SNRNP35-203ENST00000526639 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
SNRNP35-203ENST00000526639 TAF1P21675 1872 aa14.24□□□□□ -0.13
SNRNP35-203ENST00000526639 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
SNRNP35-203ENST00000526639 DDX60Q8IY21 1712 aaKnown RBP14.23□□□□□ -0.13
SNRNP35-203ENST00000526639 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms