RNA–Protein interactions for RNA: ENST00000526548.3

PICALM-205, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best)

Gene PICALM, Length 738 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-205ENST00000526548 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L21D6R901 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
PICALM-205ENST00000526548 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
PICALM-205ENST00000526548 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
PICALM-205ENST00000526548 M0R082 166 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 FURINP09958 794 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 IGFBP4P22692 258 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 ADH7P40394 386 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 COL9A3Q14050 684 aaPredicted RBP8.73□□□□□ -1.01
PICALM-205ENST00000526548 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 BHMTQ93088 406 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 ARXQ96QS3 562 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 ZNF587Q96SQ5 575 aaPredicted RBP8.73□□□□□ -1.01
PICALM-205ENST00000526548 BCS1LQ9Y276 419 aa8.73□□□□□ -1.01
PICALM-205ENST00000526548 ALBP02768 609 aa8.72□□□□□ -1.01
PICALM-205ENST00000526548 HIF1AQ16665 826 aa8.72□□□□□ -1.01
PICALM-205ENST00000526548 RTN1Q16799 776 aa8.72□□□□□ -1.01
PICALM-205ENST00000526548 CDCA8Q53HL2 280 aa8.72□□□□□ -1.01
PICALM-205ENST00000526548 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
PICALM-205ENST00000526548 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
PICALM-205ENST00000526548 K7ELQ4 463 aaPredicted RBP8.71□□□□□ -1.02
PICALM-205ENST00000526548 SPATA31C1P0DKV0 1188 aa8.7□□□□□ -1.02
PICALM-205ENST00000526548 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
PICALM-205ENST00000526548 GSX2Q9BZM3 304 aa8.7□□□□□ -1.02
PICALM-205ENST00000526548 IGFLR1Q9H665 355 aa8.7□□□□□ -1.02
PICALM-205ENST00000526548 TGFBR3LH3BV60 316 aa8.69□□□□□ -1.02
PICALM-205ENST00000526548 WEE1P30291 646 aa8.69□□□□□ -1.02
PICALM-205ENST00000526548 IER5Q5VY09 327 aa8.69□□□□□ -1.02
PICALM-205ENST00000526548 PRDM6Q9NQX0 595 aa8.69□□□□□ -1.02
PICALM-205ENST00000526548 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
PICALM-205ENST00000526548 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
PICALM-205ENST00000526548 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
PICALM-205ENST00000526548 TBC1D8BQ0IIM8 1120 aa8.68□□□□□ -1.02
PICALM-205ENST00000526548 FAM200AQ8TCP9 573 aa8.68□□□□□ -1.02
PICALM-205ENST00000526548 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
PICALM-205ENST00000526548 NID1P14543 1247 aa8.67□□□□□ -1.02
PICALM-205ENST00000526548 RFX1P22670 979 aa8.67□□□□□ -1.02
PICALM-205ENST00000526548 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
PICALM-205ENST00000526548 DOC2BQ14184 412 aa8.67□□□□□ -1.02
PICALM-205ENST00000526548 PRRT3Q5FWE3 981 aa8.67□□□□□ -1.02
PICALM-205ENST00000526548 DGKZQ13574 1117 aa8.66□□□□□ -1.02
PICALM-205ENST00000526548 CCINQ13939 588 aa8.66□□□□□ -1.02
PICALM-205ENST00000526548 QTRT2Q9H974 415 aaKnown RBP8.66□□□□□ -1.02
PICALM-205ENST00000526548 EFCC1Q9HA90 598 aa8.66□□□□□ -1.02
PICALM-205ENST00000526548 SLC6A14Q9UN76 642 aa8.66□□□□□ -1.02
PICALM-205ENST00000526548 INPP5BP32019 993 aa8.65□□□□□ -1.02
PICALM-205ENST00000526548 GATA4P43694 442 aa8.65□□□□□ -1.02
PICALM-205ENST00000526548 IDH3AP50213 366 aa8.65□□□□□ -1.02
PICALM-205ENST00000526548 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
PICALM-205ENST00000526548 PNMA5Q96PV4 448 aa8.65□□□□□ -1.02
PICALM-205ENST00000526548 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
PICALM-205ENST00000526548 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.65□□□□□ -1.02
PICALM-205ENST00000526548 FOXO3O43524 673 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 LILRB5O75023 590 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 NFKB1P19838 968 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 GRIK4Q16099 956 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 NUDT8Q8WV74 236 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 VTI1AQ96AJ9 217 aa8.64□□□□□ -1.03
PICALM-205ENST00000526548 C11orf91Q3C1V1 193 aa8.63□□□□□ -1.03
PICALM-205ENST00000526548 MICAL2O94851 1124 aa8.62□□□□□ -1.03
PICALM-205ENST00000526548 APBA3O96018 575 aa8.62□□□□□ -1.03
PICALM-205ENST00000526548 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
PICALM-205ENST00000526548 MYO19Q96H55 970 aa8.62□□□□□ -1.03
PICALM-205ENST00000526548 JPH1Q9HDC5 661 aaPredicted RBP8.62□□□□□ -1.03
PICALM-205ENST00000526548 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
PICALM-205ENST00000526548 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
PICALM-205ENST00000526548 OPLAHO14841 1288 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 PSAPL1Q6NUJ1 521 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 KRT25Q7Z3Z0 450 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 PRIMPOLQ96LW4 560 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 NAGPAQ9UK23 515 aa8.61□□□□□ -1.03
PICALM-205ENST00000526548 ZBTB42B2RXF5 422 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 EPB42P16452 691 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 ARSDP51689 593 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 SEMA6BQ9H3T3 888 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.6□□□□□ -1.032e-7■■■■■ 86.5
PICALM-205ENST00000526548 USP20Q9Y2K6 914 aa8.6□□□□□ -1.03
PICALM-205ENST00000526548 SASH3O75995 380 aa8.59□□□□□ -1.03
PICALM-205ENST00000526548 ITGB7P26010 798 aa8.59□□□□□ -1.03
PICALM-205ENST00000526548 AFF1P51825 1210 aaKnown RBP8.59□□□□□ -1.03
PICALM-205ENST00000526548 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
PICALM-205ENST00000526548 A0A0A0MRY4 1105 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 RGS9O75916 674 aaPredicted RBP8.58□□□□□ -1.04
PICALM-205ENST00000526548 MAP3K6O95382 1288 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 COX20Q5RI15 118 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 FAM35AQ86V20 835 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
PICALM-205ENST00000526548 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
PICALM-205ENST00000526548 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms