RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 ARXQ96QS3 562 aa16.19■□□□□ 0.18
UBASH3B-204ENST00000526493 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
UBASH3B-204ENST00000526493 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
UBASH3B-204ENST00000526493 RABL6Q3YEC7 729 aaPredicted RBP16.18■□□□□ 0.18
UBASH3B-204ENST00000526493 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
UBASH3B-204ENST00000526493 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
UBASH3B-204ENST00000526493 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
UBASH3B-204ENST00000526493 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 FOXO4P98177 505 aa16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
UBASH3B-204ENST00000526493 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 LAMB2P55268 1798 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 CASZ1Q86V15 1759 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 CAMTA2O94983 1202 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 RGS17Q9UGC6 210 aaPredicted RBP16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
UBASH3B-204ENST00000526493 GPTP24298 496 aa16.15■□□□□ 0.18
UBASH3B-204ENST00000526493 DDX60Q8IY21 1712 aaKnown RBP16.15■□□□□ 0.18
UBASH3B-204ENST00000526493 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
UBASH3B-204ENST00000526493 PA2G4Q9UQ80 394 aaKnown RBP16.15■□□□□ 0.18
UBASH3B-204ENST00000526493 SALL3Q9BXA9 1300 aa16.15■□□□□ 0.18
UBASH3B-204ENST00000526493 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 RXRBP28702 533 aa16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 RFX5P48382 616 aaPredicted RBP16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
UBASH3B-204ENST00000526493 EP400Q96L91 3159 aa16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 ZBTB38Q8NAP3 1195 aaPredicted RBP16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
UBASH3B-204ENST00000526493 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 TRIM37O94972 964 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
UBASH3B-204ENST00000526493 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
UBASH3B-204ENST00000526493 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 PDE1AP54750 535 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 TTC22Q5TAA0 569 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 ERC1Q8IUD2 1116 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
UBASH3B-204ENST00000526493 RGL2O15211 777 aa16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 GNPATO15228 680 aa16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 SASH1O94885 1247 aa16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
UBASH3B-204ENST00000526493 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.17
UBASH3B-204ENST00000526493 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.17
UBASH3B-204ENST00000526493 CSF1RP07333 972 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 SIL1Q9H173 461 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
UBASH3B-204ENST00000526493 SEC24BO95487 1268 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 MX1P20591 662 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 NARFQ9UHQ1 456 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
UBASH3B-204ENST00000526493 SPEF2Q9C093 1822 aa16.06■□□□□ 0.16
UBASH3B-204ENST00000526493 AOX1Q06278 1338 aa16.06■□□□□ 0.16
UBASH3B-204ENST00000526493 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
UBASH3B-204ENST00000526493 NUTM1Q86Y26 1132 aa16.06■□□□□ 0.16
UBASH3B-204ENST00000526493 NIP7Q9Y221 180 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBASH3B-204ENST00000526493 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 NTSR2O95665 410 aa16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 PROM2Q8N271 834 aa16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 AK7Q96M32 723 aa16.05■□□□□ 0.16
UBASH3B-204ENST00000526493 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms