RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 RUFY3Q7L099 469 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 CHD1LQ86WJ1 897 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 ARHGAP25P42331 645 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 ARFGAP2Q8N6H7 521 aa8.82□□□□□ -1
LRRK1-205ENST00000526457 PHLDB2Q86SQ0 1253 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 ALDH3A1P30838 453 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 KIAA0753Q2KHM9 967 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 TBC1D2Q9BYX2 928 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 XAB2Q9HCS7 855 aaKnown RBP8.81□□□□□ -1
LRRK1-205ENST00000526457 NDUFAB1O14561 156 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
LRRK1-205ENST00000526457 KIAA1107Q9UPP5 1409 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 EID1Q9Y6B2 187 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 WASF1Q92558 559 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 BAG4O95429 457 aaKnown RBP8.81□□□□□ -1
LRRK1-205ENST00000526457 NEDD9Q14511 834 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 GSDMBQ8TAX9 411 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 CCDC77Q9BR77 488 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 KRT32Q14532 448 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 MRFAP1L1Q96HT8 127 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 CACNA1FO60840 1977 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 BIN1O00499 593 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 LRRC45Q96CN5 670 aa8.81□□□□□ -1
LRRK1-205ENST00000526457 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 PRC1O43663 620 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 PPFIA2O75334 1257 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 GNAI2P04899 355 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 COG7P83436 770 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 NESP48681 1621 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 TUBB4AP04350 444 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 MTIF2P46199 727 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 IFI16Q16666 785 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 LRSAM1Q6UWE0 723 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 SELENOOQ9BVL4 669 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 VIMP08670 466 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 MVPQ14764 893 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 SH2B1Q9NRF2 756 aaPredicted RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 RHOXF2BP0C7M4 288 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 PPP2R5AQ15172 486 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 RHOXF2Q9BQY4 288 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 USH1CQ9Y6N9 552 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 NUTM2DQ5VT03 806 aaPredicted RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 UBE2HP62256 183 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 TTC12Q9H892 705 aaPredicted RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 RLBP1P12271 317 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 ARAP1Q96P48 1450 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 NKTRP30414 1462 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 SMIM23A6NLE4 172 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 CCDC172P0C7W6 258 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -1
LRRK1-205ENST00000526457 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
LRRK1-205ENST00000526457 KIF5AQ12840 1032 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 EPSTI1Q96J88 318 aa8.8□□□□□ -1
LRRK1-205ENST00000526457 TUBBP07437 444 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 PNMA8AQ86V59 439 aaPredicted RBP8.79□□□□□ -1
LRRK1-205ENST00000526457 MYO1BO43795 1136 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 HPDP32754 393 aaPredicted RBP8.79□□□□□ -1
LRRK1-205ENST00000526457 LCA5Q86VQ0 697 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 ARHGAP5Q13017 1502 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 TRIM68Q6AZZ1 485 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 CAPZA3Q96KX2 299 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
LRRK1-205ENST00000526457 FRMD3A2A2Y4 597 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 VPS41P49754 854 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 TXNDC9O14530 226 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 PIK3R5Q8WYR1 880 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
LRRK1-205ENST00000526457 PCF11O94913 1555 aaKnown RBP8.79□□□□□ -1
LRRK1-205ENST00000526457 LUC7L3O95232 432 aaKnown RBP8.79□□□□□ -1
LRRK1-205ENST00000526457 SYNJ2O15056 1496 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 PPP2R3AQ06190 1150 aa8.79□□□□□ -1
LRRK1-205ENST00000526457 KIF1BO60333 1816 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 RUSC2Q8N2Y8 1516 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 SIL1Q9H173 461 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 KCNK9Q9NPC2 374 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 FAF1Q9UNN5 650 aaPredicted RBP8.78□□□□□ -1
LRRK1-205ENST00000526457 RNF8O76064 485 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 IQGAP2Q13576 1575 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 ZSCAN26Q16670 478 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 RNF10Q8N5U6 811 aaKnown RBP8.78□□□□□ -1
LRRK1-205ENST00000526457 RIPOR2Q9Y4F9 1068 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 VAV2P52735 878 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 ARHGEF2Q92974 986 aaKnown RBP8.78□□□□□ -1
LRRK1-205ENST00000526457 MCUR1Q96AQ8 359 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 GDPD2Q9HCC8 539 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 MRFAP1Q9Y605 127 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 CCDC186Q7Z3E2 898 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 BICDL2A1A5D9 508 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 TRIM21P19474 475 aaKnown RBP8.78□□□□□ -1
LRRK1-205ENST00000526457 CCDC144CPQ8IYA2 1237 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
LRRK1-205ENST00000526457 UBASH3AP57075 661 aa8.77□□□□□ -1
LRRK1-205ENST00000526457 ATP2B2Q01814 1243 aa8.77□□□□□ -1
LRRK1-205ENST00000526457 LRRC23Q53EV4 343 aaPredicted RBP8.77□□□□□ -1
LRRK1-205ENST00000526457 CWC27Q6UX04 472 aaKnown RBP8.77□□□□□ -1
LRRK1-205ENST00000526457 CNNM3Q8NE01 707 aa8.77□□□□□ -1
LRRK1-205ENST00000526457 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms