RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 NUP98P52948 1817 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 ATP5J2-PTCD1G3V325 749 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 PYGBP11216 843 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 RCAN3Q9UKA8 241 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
TRIM49D2-201ENST00000526396 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 ERVV-1B6SEH8 477 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 TM4SF1P30408 202 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 MYD88Q99836 296 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
TRIM49D2-201ENST00000526396 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 IGKV5-2P06315 115 aa11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 NIP7Q9Y221 180 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM49D2-201ENST00000526396 PLIN1O60240 522 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 TCIRG1Q13488 830 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 SUSD4Q5VX71 490 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 SYNE4Q8N205 404 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 DNAAF4Q8WXU2 420 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.6
TRIM49D2-201ENST00000526396 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 TRIM27P14373 513 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 NLRP10Q86W26 655 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 METTL22Q9BUU2 404 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 SPON1Q9HCB6 807 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 AFDNP55196 1824 aaKnown RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 PTPRCP08575 1304 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 UTRNP46939 3433 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 RLBP1P12271 317 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
TRIM49D2-201ENST00000526396 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 NEURL1BA8MQ27 555 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 NTSR2O95665 410 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 SERPINB2P05120 415 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 LRP5O75197 1615 aa11.25□□□□□ -0.61
TRIM49D2-201ENST00000526396 ABCC4O15439 1325 aa11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 POLD1P28340 1107 aa11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D2-201ENST00000526396 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 PXDNLA1KZ92 1463 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 PANK1Q8TE04 598 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 ANKRD31Q8N7Z5 1873 aa11.23□□□□□ -0.61
TRIM49D2-201ENST00000526396 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 HCLS1P14317 486 aaPredicted RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 ARHGAP45Q92619 1136 aa11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 PPP1R1BQ9UD71 204 aaPredicted RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 COL11A2P13942 1736 aaPredicted RBP11.22□□□□□ -0.61
TRIM49D2-201ENST00000526396 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 GCKRQ14397 625 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 NLGN2Q8NFZ4 835 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
TRIM49D2-201ENST00000526396 COL4A1P02462 1669 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms