RNA–Protein interactions for RNA: ENST00000526372.1

RAB38-202, Transcript of RAB38, member RAS oncogene family, humanhuman

TSL 3

Gene RAB38, Length 1,007 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-202ENST00000526372 RIC3Q7Z5B4 369 aa20.34■□□□□ 0.85
RAB38-202ENST00000526372 UTP14AQ9BVJ6 771 aaKnown RBP20.34■□□□□ 0.85
RAB38-202ENST00000526372 STK31Q9BXU1 1019 aa20.34■□□□□ 0.85
RAB38-202ENST00000526372 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
RAB38-202ENST00000526372 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
RAB38-202ENST00000526372 LAMB2P55268 1798 aa20.33■□□□□ 0.84
RAB38-202ENST00000526372 SBF1O95248 1867 aa20.33■□□□□ 0.84
RAB38-202ENST00000526372 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
RAB38-202ENST00000526372 C21orf2O43822 256 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 RASSF7Q02833 373 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 ZNF784Q8NCA9 323 aaPredicted RBP20.32■□□□□ 0.84
RAB38-202ENST00000526372 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 ISCA1Q9BUE6 129 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
RAB38-202ENST00000526372 KLRG2A4D1S0 409 aaPredicted RBP20.31■□□□□ 0.84
RAB38-202ENST00000526372 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
RAB38-202ENST00000526372 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
RAB38-202ENST00000526372 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
RAB38-202ENST00000526372 MYD88Q99836 296 aa20.31■□□□□ 0.84
RAB38-202ENST00000526372 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
RAB38-202ENST00000526372 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
RAB38-202ENST00000526372 NPR1P16066 1061 aa20.3■□□□□ 0.84
RAB38-202ENST00000526372 CNKSR1Q969H4 720 aa20.3■□□□□ 0.84
RAB38-202ENST00000526372 TAF1P21675 1872 aa20.29■□□□□ 0.84
RAB38-202ENST00000526372 OLFM4Q6UX06 510 aa20.29■□□□□ 0.84
RAB38-202ENST00000526372 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
RAB38-202ENST00000526372 MAP3K2Q9Y2U5 619 aa20.29■□□□□ 0.84
RAB38-202ENST00000526372 DDX60Q8IY21 1712 aaKnown RBP20.29■□□□□ 0.84
RAB38-202ENST00000526372 ADCY9O60503 1353 aa20.29■□□□□ 0.84
RAB38-202ENST00000526372 PI4KAP2A4QPH2 592 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 PI4KAP1Q8N8J0 262 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 JARID2Q92833 1246 aaPredicted RBP20.28■□□□□ 0.84
RAB38-202ENST00000526372 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 FER1L6Q2WGJ9 1857 aa20.28■□□□□ 0.84
RAB38-202ENST00000526372 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
RAB38-202ENST00000526372 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
RAB38-202ENST00000526372 PRELPP51888 382 aa20.27■□□□□ 0.84
RAB38-202ENST00000526372 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
RAB38-202ENST00000526372 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
RAB38-202ENST00000526372 ZNF526Q8TF50 670 aaPredicted RBP20.27■□□□□ 0.84
RAB38-202ENST00000526372 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
RAB38-202ENST00000526372 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.83
RAB38-202ENST00000526372 E9PSI1 815 aa20.26■□□□□ 0.83
RAB38-202ENST00000526372 NFKBIEO00221 500 aa20.26■□□□□ 0.83
RAB38-202ENST00000526372 FLIIQ13045 1269 aa20.26■□□□□ 0.83
RAB38-202ENST00000526372 SLC10A5Q5PT55 438 aa20.26■□□□□ 0.83
RAB38-202ENST00000526372 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
RAB38-202ENST00000526372 METTL22Q9BUU2 404 aaPredicted RBP20.26■□□□□ 0.83
RAB38-202ENST00000526372 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
RAB38-202ENST00000526372 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
RAB38-202ENST00000526372 FKBP5Q13451 457 aaPredicted RBP20.24■□□□□ 0.83
RAB38-202ENST00000526372 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
RAB38-202ENST00000526372 IGKV5-2P06315 115 aa20.23■□□□□ 0.83
RAB38-202ENST00000526372 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
RAB38-202ENST00000526372 CWF19L2Q2TBE0 894 aaKnown RBP20.23■□□□□ 0.83
RAB38-202ENST00000526372 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
RAB38-202ENST00000526372 HOXA10P31260 410 aaPredicted RBP20.22■□□□□ 0.83
RAB38-202ENST00000526372 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
RAB38-202ENST00000526372 F6X3S4 739 aa20.21■□□□□ 0.83
RAB38-202ENST00000526372 ALDH1B1P30837 517 aa20.21■□□□□ 0.83
RAB38-202ENST00000526372 CWC25Q9NXE8 425 aaPredicted RBP20.21■□□□□ 0.83
RAB38-202ENST00000526372 COL4A1P02462 1669 aa20.21■□□□□ 0.83
RAB38-202ENST00000526372 TIAM2Q8IVF5 1701 aa20.2■□□□□ 0.82
RAB38-202ENST00000526372 IRS4O14654 1257 aaPredicted RBP20.2■□□□□ 0.82
RAB38-202ENST00000526372 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
RAB38-202ENST00000526372 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
RAB38-202ENST00000526372 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
RAB38-202ENST00000526372 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
RAB38-202ENST00000526372 ABCC4O15439 1325 aa20.2■□□□□ 0.82
RAB38-202ENST00000526372 CCDC93Q567U6 631 aa20.19■□□□□ 0.82
RAB38-202ENST00000526372 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
RAB38-202ENST00000526372 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
RAB38-202ENST00000526372 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
RAB38-202ENST00000526372 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
RAB38-202ENST00000526372 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
RAB38-202ENST00000526372 PPEF1O14829 653 aaPredicted RBP20.18■□□□□ 0.82
RAB38-202ENST00000526372 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
RAB38-202ENST00000526372 LMNB1P20700 586 aa20.18■□□□□ 0.82
RAB38-202ENST00000526372 NEXNQ0ZGT2 675 aa20.18■□□□□ 0.82
RAB38-202ENST00000526372 TAOK3Q9H2K8 898 aa20.18■□□□□ 0.82
RAB38-202ENST00000526372 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
RAB38-202ENST00000526372 MRPL50Q8N5N7 158 aaKnown RBP20.16■□□□□ 0.82
RAB38-202ENST00000526372 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
RAB38-202ENST00000526372 CCDC85AQ96PX6 553 aaPredicted RBP20.16■□□□□ 0.82
RAB38-202ENST00000526372 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
RAB38-202ENST00000526372 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
RAB38-202ENST00000526372 GPBP1L1Q9HC44 474 aaPredicted RBP20.15■□□□□ 0.82
RAB38-202ENST00000526372 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
RAB38-202ENST00000526372 MYH3P11055 1940 aa20.15■□□□□ 0.82
RAB38-202ENST00000526372 LTBP3Q9NS15 1303 aa20.14■□□□□ 0.81
RAB38-202ENST00000526372 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
RAB38-202ENST00000526372 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
RAB38-202ENST00000526372 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
RAB38-202ENST00000526372 GRAPQ13588 217 aa20.13■□□□□ 0.81
RAB38-202ENST00000526372 GCKRQ14397 625 aa20.13■□□□□ 0.81
RAB38-202ENST00000526372 LINS1Q8NG48 757 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms