RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
C11orf54-203ENST00000526335 ZDHHC1Q8WTX9 485 aa9.6□□□□□ -0.87
C11orf54-203ENST00000526335 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
C11orf54-203ENST00000526335 LCE4AQ5TA78 99 aa9.59□□□□□ -0.87
C11orf54-203ENST00000526335 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
C11orf54-203ENST00000526335 ABL2P42684 1182 aa9.58□□□□□ -0.88
C11orf54-203ENST00000526335 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
C11orf54-203ENST00000526335 ZNF232Q9UNY5 417 aa9.58□□□□□ -0.88
C11orf54-203ENST00000526335 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
C11orf54-203ENST00000526335 WASHC4Q2M389 1173 aa9.57□□□□□ -0.88
C11orf54-203ENST00000526335 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
C11orf54-203ENST00000526335 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
C11orf54-203ENST00000526335 AKTIPQ9H8T0 292 aa9.57□□□□□ -0.88
C11orf54-203ENST00000526335 NAGPAQ9UK23 515 aa9.57□□□□□ -0.88
C11orf54-203ENST00000526335 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 NOS2P35228 1153 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 KCNQ4P56696 695 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 SEMA3FQ13275 785 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 OGFOD2Q6N063 350 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 RHPN1Q8TCX5 695 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 KRTAP4-5Q9BYR2 181 aa9.56□□□□□ -0.88
C11orf54-203ENST00000526335 DNAJB12Q9NXW2 375 aaKnown RBP9.56□□□□□ -0.88
C11orf54-203ENST00000526335 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
C11orf54-203ENST00000526335 GSC2O15499 205 aa9.55□□□□□ -0.88
C11orf54-203ENST00000526335 TEAD4Q15561 434 aa9.55□□□□□ -0.88
C11orf54-203ENST00000526335 ALX3O95076 343 aa9.54□□□□□ -0.88
C11orf54-203ENST00000526335 SCHIP1Q9P0W5 487 aaPredicted RBP9.54□□□□□ -0.88
C11orf54-203ENST00000526335 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
C11orf54-203ENST00000526335 C8AP07357 584 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 SPINK2P20155 84 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 SOX11P35716 441 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 WFDC8Q8IUA0 241 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 ADGRE2Q9UHX3 823 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 RAXQ9Y2V3 346 aa9.52□□□□□ -0.88
C11orf54-203ENST00000526335 BACH1O14867 736 aa9.51□□□□□ -0.89
C11orf54-203ENST00000526335 WNT11O96014 354 aa9.51□□□□□ -0.89
C11orf54-203ENST00000526335 GRIK1P39086 918 aa9.51□□□□□ -0.89
C11orf54-203ENST00000526335 INTS5Q6P9B9 1019 aaKnown RBP9.51□□□□□ -0.89
C11orf54-203ENST00000526335 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
C11orf54-203ENST00000526335 TYRO3Q06418 890 aa9.5□□□□□ -0.89
C11orf54-203ENST00000526335 TBCELQ5QJ74 424 aa9.5□□□□□ -0.89
C11orf54-203ENST00000526335 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
C11orf54-203ENST00000526335 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
C11orf54-203ENST00000526335 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
C11orf54-203ENST00000526335 STOML1Q9UBI4 398 aa9.49□□□□□ -0.89
C11orf54-203ENST00000526335 SERTM1A2A2V5 107 aa9.48□□□□□ -0.89
C11orf54-203ENST00000526335 CPB1P15086 417 aa9.48□□□□□ -0.89
C11orf54-203ENST00000526335 GRIK5Q16478 980 aa9.48□□□□□ -0.89
C11orf54-203ENST00000526335 EML3Q32P44 896 aa9.48□□□□□ -0.89
C11orf54-203ENST00000526335 ZDHHC13Q8IUH4 622 aa9.48□□□□□ -0.89
C11orf54-203ENST00000526335 DLL1O00548 723 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 DTX1Q86Y01 620 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 SLC9A9Q8IVB4 645 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 PNMA5Q96PV4 448 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 PCDHGA11Q9Y5H2 935 aa9.47□□□□□ -0.89
C11orf54-203ENST00000526335 F8W735 103 aaPredicted RBP9.46□□□□□ -0.9
C11orf54-203ENST00000526335 PIK3CDO00329 1044 aa9.46□□□□□ -0.9
C11orf54-203ENST00000526335 MCM6Q14566 821 aa9.46□□□□□ -0.9
C11orf54-203ENST00000526335 MRPL18Q9H0U6 180 aaKnown RBP9.46□□□□□ -0.9
C11orf54-203ENST00000526335 NOD1Q9Y239 953 aa9.46□□□□□ -0.9
C11orf54-203ENST00000526335 SKIP12755 728 aa9.45□□□□□ -0.9
C11orf54-203ENST00000526335 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
C11orf54-203ENST00000526335 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
C11orf54-203ENST00000526335 GLB1P16278 677 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 GTF2IP78347 998 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 PLAURQ03405 335 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 PSME1Q06323 249 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 POU5F2Q8N7G0 328 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
C11orf54-203ENST00000526335 LPIN3Q9BQK8 851 aa9.44□□□□□ -0.9
C11orf54-203ENST00000526335 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
C11orf54-203ENST00000526335 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-203ENST00000526335 SUSD3Q96L08 255 aa9.43□□□□□ -0.9
C11orf54-203ENST00000526335 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
C11orf54-203ENST00000526335 NFKB1P19838 968 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 ELMSAN1Q6PJG2 1045 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
C11orf54-203ENST00000526335 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
C11orf54-203ENST00000526335 COG6Q9Y2V7 657 aa9.41□□□□□ -0.9
C11orf54-203ENST00000526335 NFIAQ12857 509 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 NCOA4Q13772 614 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 PCSK7Q16549 785 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 WWC1Q8IX03 1113 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
C11orf54-203ENST00000526335 ABI1Q8IZP0 508 aa9.39□□□□□ -0.91
C11orf54-203ENST00000526335 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
C11orf54-203ENST00000526335 PHACTR1Q9C0D0 580 aa9.39□□□□□ -0.91
C11orf54-203ENST00000526335 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
C11orf54-203ENST00000526335 EPHA4P54764 986 aa9.38□□□□□ -0.91
C11orf54-203ENST00000526335 Q6ZS46 218 aa9.38□□□□□ -0.91
C11orf54-203ENST00000526335 ASIC4Q96FT7 647 aa9.38□□□□□ -0.91
C11orf54-203ENST00000526335 ALG2Q9H553 416 aa9.38□□□□□ -0.91
C11orf54-203ENST00000526335 PRR19A6NJB7 356 aa9.37□□□□□ -0.91
C11orf54-203ENST00000526335 CCINQ13939 588 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms