RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ERFEQ4G0M1 354 aa16.46■□□□□ 0.23
SMPD1-202ENST00000526280 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
SMPD1-202ENST00000526280 A0A0G2JLW4 131 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 PDE6BP35913 854 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
SMPD1-202ENST00000526280 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
SMPD1-202ENST00000526280 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 PXDNLA1KZ92 1463 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 BCAR3O75815 825 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 DPEP1P16444 411 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 KCNA3P22001 575 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 LINS1Q8NG48 757 aa16.45■□□□□ 0.22
SMPD1-202ENST00000526280 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-202ENST00000526280 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 KIAA1551Q9HCM1 1747 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-202ENST00000526280 CHRNA5P30532 468 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 CWF19L2Q2TBE0 894 aaKnown RBP16.44■□□□□ 0.22
SMPD1-202ENST00000526280 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 FAM89AQ96GI7 184 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
SMPD1-202ENST00000526280 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
SMPD1-202ENST00000526280 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
SMPD1-202ENST00000526280 H0YIN7 160 aa16.43■□□□□ 0.22
SMPD1-202ENST00000526280 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
SMPD1-202ENST00000526280 ZBTB38Q8NAP3 1195 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-202ENST00000526280 ARHGAP45Q92619 1136 aa16.43■□□□□ 0.22
SMPD1-202ENST00000526280 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-202ENST00000526280 RIC1Q4ADV7 1423 aa16.42■□□□□ 0.22
SMPD1-202ENST00000526280 PCCAP05165 728 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-202ENST00000526280 GCKRQ14397 625 aa16.42■□□□□ 0.22
SMPD1-202ENST00000526280 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
SMPD1-202ENST00000526280 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
SMPD1-202ENST00000526280 SRGNP10124 158 aa16.41■□□□□ 0.22
SMPD1-202ENST00000526280 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-202ENST00000526280 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
SMPD1-202ENST00000526280 H7C1W4 665 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 ALDH1L1O75891 902 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-202ENST00000526280 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
SMPD1-202ENST00000526280 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-202ENST00000526280 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
SMPD1-202ENST00000526280 JARID2Q92833 1246 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-202ENST00000526280 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-202ENST00000526280 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
SMPD1-202ENST00000526280 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
SMPD1-202ENST00000526280 GOLGB1Q14789 3259 aaKnown RBP16.38■□□□□ 0.21
SMPD1-202ENST00000526280 BRCA1P38398 1863 aaKnown RBP16.38■□□□□ 0.21
SMPD1-202ENST00000526280 TNRC6CQ9HCJ0 1690 aaKnown RBP16.38■□□□□ 0.21
SMPD1-202ENST00000526280 NPR1P16066 1061 aa16.38■□□□□ 0.21
SMPD1-202ENST00000526280 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
SMPD1-202ENST00000526280 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
SMPD1-202ENST00000526280 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMPD1-202ENST00000526280 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
SMPD1-202ENST00000526280 DLEC1Q9Y238 1755 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-202ENST00000526280 CDHR2Q9BYE9 1310 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 TRIM27P14373 513 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
SMPD1-202ENST00000526280 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-202ENST00000526280 CASP7P55210 303 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
SMPD1-202ENST00000526280 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 UBE3BQ7Z3V4 1068 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
SMPD1-202ENST00000526280 YBX3P16989 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMPD1-202ENST00000526280 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
SMPD1-202ENST00000526280 GPR162Q16538 588 aa16.36■□□□□ 0.21
SMPD1-202ENST00000526280 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SMPD1-202ENST00000526280 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
SMPD1-202ENST00000526280 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
SMPD1-202ENST00000526280 ABCC4O15439 1325 aa16.35■□□□□ 0.21
SMPD1-202ENST00000526280 GRM8O00222 908 aa16.35■□□□□ 0.21
SMPD1-202ENST00000526280 PDE8AO60658 829 aa16.35■□□□□ 0.21
SMPD1-202ENST00000526280 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
SMPD1-202ENST00000526280 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
SMPD1-202ENST00000526280 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
SMPD1-202ENST00000526280 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-202ENST00000526280 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
SMPD1-202ENST00000526280 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
SMPD1-202ENST00000526280 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
SMPD1-202ENST00000526280 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
SMPD1-202ENST00000526280 UTYO14607 1347 aa16.33■□□□□ 0.21
SMPD1-202ENST00000526280 LAMB2P55268 1798 aa16.33■□□□□ 0.21
SMPD1-202ENST00000526280 YY1P25490 414 aa16.33■□□□□ 0.2
SMPD1-202ENST00000526280 INTS3Q68E01 1043 aaKnown RBP16.33■□□□□ 0.2
SMPD1-202ENST00000526280 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
SMPD1-202ENST00000526280 USP44Q9H0E7 712 aa16.33■□□□□ 0.2
SMPD1-202ENST00000526280 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
SMPD1-202ENST00000526280 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
SMPD1-202ENST00000526280 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
SMPD1-202ENST00000526280 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms