RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SHISA2Q6UWI4 295 aa4.95□□□□□ -1.62
TRAPPC4-207ENST00000526141 RAB44Q7Z6P3 723 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC4-207ENST00000526141 BHMTQ93088 406 aa4.95□□□□□ -1.62
TRAPPC4-207ENST00000526141 SFI1A8K8P3 1242 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 TXKP42681 527 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 ABL2P42684 1182 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 EPHA4P54764 986 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 PSMA6P60900 246 aaKnown RBP4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 TBC1D8BQ0IIM8 1120 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 PCSK7Q16549 785 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 HIF1AQ16665 826 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 MCTP1Q6DN14 999 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 FMR1NBQ8N0W7 255 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 DTWD1Q8N5C7 304 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 NFATC2IPQ8NCF5 419 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 NUDT8Q8WV74 236 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 SSBP4Q9BWG4 385 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 SLC6A14Q9UN76 642 aa4.94□□□□□ -1.62
TRAPPC4-207ENST00000526141 LOC105371045A0A1W2PR82 267 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 RGS9O75916 674 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 SKIP12755 728 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 HIRAP54198 1017 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 PSAPL1Q6NUJ1 521 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 TRIM50Q86XT4 487 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 DMRTC2Q8IXT2 367 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 TNS4Q8IZW8 715 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 RGS22Q8NE09 1264 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 IGFLR1Q9H665 355 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 GDPD2Q9HCC8 539 aa4.93□□□□□ -1.62
TRAPPC4-207ENST00000526141 AFF1P51825 1210 aaKnown RBP4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 TYRO3Q06418 890 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 TBCELQ5QJ74 424 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 WFDC12Q8WWY7 111 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 SUSD3Q96L08 255 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 PNMA5Q96PV4 448 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 PCMTD2Q9NV79 361 aa4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 COL17A1Q9UMD9 1497 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC4-207ENST00000526141 ATP1A2P50993 1020 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 NCOA4Q13772 614 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 TMCO4Q5TGY1 634 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 IGF2-ASQ6U949 168 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 FBXO11Q86XK2 927 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 CLUAP1Q96AJ1 413 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 HSH2DQ96JZ2 352 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 PHACTR1Q9C0D0 580 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 DNAJB12Q9NXW2 375 aaKnown RBP4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 SERPINA10Q9UK55 444 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 HCN4Q9Y3Q4 1203 aa4.91□□□□□ -1.62
TRAPPC4-207ENST00000526141 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 PIK3CDO00329 1044 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 YBX3P16989 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 IREB2P48200 963 aaKnown RBP4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 SH3PXD2AQ5TCZ1 1133 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 MSL1Q68DK7 614 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 POTEAQ6S8J7 498 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 ILDR2Q71H61 639 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 BTLAQ7Z6A9 289 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 AEBP1Q8IUX7 1158 aa4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 CCDC97Q96F63 343 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC4-207ENST00000526141 SHROOM4Q9ULL8 1493 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 M0R2N6 131 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 COBLO75128 1261 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 CCINQ13939 588 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 PRR23CQ6ZRP0 262 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 WWC1Q8IX03 1113 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 ZNF280CQ8ND82 737 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 TSPAN10Q9H1Z9 355 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 FRRS1LQ9P0K9 344 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 MTMR7Q9Y216 660 aa4.89□□□□□ -1.63
TRAPPC4-207ENST00000526141 USP17L5A8MUK1 530 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 IGSF3O75054 1194 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 NOS3P29474 1203 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 MFAP1P55081 439 aaKnown RBP4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 MCM6Q14566 821 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 CCDC102BQ68D86 513 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 FAM35AQ86V20 835 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 PROSER2Q86WR7 435 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 WFDC8Q8IUA0 241 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 TPCN2Q8NHX9 752 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 FMNL2Q96PY5 1086 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 GSX2Q9BZM3 304 aa4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 RBM19Q9Y4C8 960 aaKnown RBP4.88□□□□□ -1.63
TRAPPC4-207ENST00000526141 PPP1R12BO60237 982 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 HMGB1P09429 215 aaKnown RBP4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 EPB42P16452 691 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 IRAK1P51617 712 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 IER5Q5VY09 327 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 ALDH16A1Q8IZ83 802 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 STAG2Q8N3U4 1231 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 GAS2L2Q8NHY3 880 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 TTC9Q92623 222 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 ALG2Q9H553 416 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 NAGPAQ9UK23 515 aa4.87□□□□□ -1.63
TRAPPC4-207ENST00000526141 ZBTB7BO15156 539 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 GSC2O15499 205 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 MAP3K6O95382 1288 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms