RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 COL4A1P02462 1669 aa15.74■□□□□ 0.11
SSBP3-210ENST00000525990 CCDC93Q567U6 631 aa15.74■□□□□ 0.11
SSBP3-210ENST00000525990 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-210ENST00000525990 RBM46Q8TBY0 533 aaKnown RBP15.74■□□□□ 0.11
SSBP3-210ENST00000525990 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
SSBP3-210ENST00000525990 ZNF277Q9NRM2 450 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-210ENST00000525990 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
SSBP3-210ENST00000525990 HDGFL1Q5TGJ6 251 aa15.73■□□□□ 0.11
SSBP3-210ENST00000525990 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
SSBP3-210ENST00000525990 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
SSBP3-210ENST00000525990 DDNO94850 711 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-210ENST00000525990 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
SSBP3-210ENST00000525990 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
SSBP3-210ENST00000525990 SCN4AP35499 1836 aa15.72■□□□□ 0.11
SSBP3-210ENST00000525990 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
SSBP3-210ENST00000525990 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-210ENST00000525990 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-210ENST00000525990 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
SSBP3-210ENST00000525990 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
SSBP3-210ENST00000525990 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
SSBP3-210ENST00000525990 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
SSBP3-210ENST00000525990 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
SSBP3-210ENST00000525990 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
SSBP3-210ENST00000525990 HCLS1P14317 486 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-210ENST00000525990 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
SSBP3-210ENST00000525990 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-210ENST00000525990 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
SSBP3-210ENST00000525990 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
SSBP3-210ENST00000525990 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
SSBP3-210ENST00000525990 LRRC37AA6NMS7 1700 aa15.69■□□□□ 0.1
SSBP3-210ENST00000525990 ZEB1P37275 1124 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-210ENST00000525990 APLP1P51693 650 aa15.69■□□□□ 0.1
SSBP3-210ENST00000525990 TCIRG1Q13488 830 aa15.69■□□□□ 0.1
SSBP3-210ENST00000525990 DPY19L2Q6NUT2 758 aa15.69■□□□□ 0.1
SSBP3-210ENST00000525990 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-210ENST00000525990 PPEF1O14829 653 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-210ENST00000525990 HOXB7P09629 217 aa15.68■□□□□ 0.1
SSBP3-210ENST00000525990 FSTL1Q12841 308 aa15.68■□□□□ 0.1
SSBP3-210ENST00000525990 DNAJC5GQ8N7S2 189 aa15.68■□□□□ 0.1
SSBP3-210ENST00000525990 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
SSBP3-210ENST00000525990 PHAXQ9H814 394 aaKnown RBP15.68■□□□□ 0.1
SSBP3-210ENST00000525990 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
SSBP3-210ENST00000525990 ADAMTSL1Q8N6G6 1762 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 IARSP41252 1262 aaKnown RBP15.67■□□□□ 0.1
SSBP3-210ENST00000525990 SLC10A5Q5PT55 438 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 RTKN2Q8IZC4 609 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 SMC1BQ8NDV3 1235 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 TSR2Q969E8 191 aaKnown RBP15.67■□□□□ 0.1
SSBP3-210ENST00000525990 RBM17Q96I25 401 aaKnown RBP15.67■□□□□ 0.1
SSBP3-210ENST00000525990 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 DBF4Q9UBU7 674 aaPredicted RBP15.67■□□□□ 0.1
SSBP3-210ENST00000525990 ABCC4O15439 1325 aa15.67■□□□□ 0.1
SSBP3-210ENST00000525990 GNAI1P63096 354 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 TSPYL6Q8N831 410 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
SSBP3-210ENST00000525990 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
SSBP3-210ENST00000525990 HSP90AB3PQ58FF7 597 aa15.65■□□□□ 0.1
SSBP3-210ENST00000525990 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
SSBP3-210ENST00000525990 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
SSBP3-210ENST00000525990 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
SSBP3-210ENST00000525990 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
SSBP3-210ENST00000525990 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
SSBP3-210ENST00000525990 PSMD1Q99460 953 aa15.64■□□□□ 0.09
SSBP3-210ENST00000525990 ISCA1Q9BUE6 129 aa15.64■□□□□ 0.09
SSBP3-210ENST00000525990 HYPKQ9NX55 129 aa15.64■□□□□ 0.09
SSBP3-210ENST00000525990 FZD9O00144 591 aa15.63■□□□□ 0.09
SSBP3-210ENST00000525990 RNF123Q5XPI4 1314 aa15.63■□□□□ 0.09
SSBP3-210ENST00000525990 MYH3P11055 1940 aa15.62■□□□□ 0.09
SSBP3-210ENST00000525990 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
SSBP3-210ENST00000525990 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
SSBP3-210ENST00000525990 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-210ENST00000525990 ATP6V0A2Q9Y487 856 aa15.62■□□□□ 0.09
SSBP3-210ENST00000525990 AOC3Q16853 763 aa15.61■□□□□ 0.09
SSBP3-210ENST00000525990 CC2D2BQ6DHV5 1058 aa15.61■□□□□ 0.09
SSBP3-210ENST00000525990 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
SSBP3-210ENST00000525990 TAF1DQ9H5J8 278 aaPredicted RBP15.61■□□□□ 0.09
SSBP3-210ENST00000525990 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
SSBP3-210ENST00000525990 ANP32CO43423 234 aa15.6■□□□□ 0.09
SSBP3-210ENST00000525990 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
SSBP3-210ENST00000525990 LARGE2Q8N3Y3 721 aa15.6■□□□□ 0.09
SSBP3-210ENST00000525990 MYD88Q99836 296 aa15.6■□□□□ 0.09
SSBP3-210ENST00000525990 EAPPQ56P03 285 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-210ENST00000525990 CHADLQ6NUI6 762 aa15.59■□□□□ 0.09
SSBP3-210ENST00000525990 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
SSBP3-210ENST00000525990 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
SSBP3-210ENST00000525990 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
SSBP3-210ENST00000525990 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
SSBP3-210ENST00000525990 CACNA1FO60840 1977 aa15.58■□□□□ 0.09
SSBP3-210ENST00000525990 PPIP5K2O43314 1243 aa15.58■□□□□ 0.08
SSBP3-210ENST00000525990 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
SSBP3-210ENST00000525990 GRAPQ13588 217 aa15.58■□□□□ 0.08
SSBP3-210ENST00000525990 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
SSBP3-210ENST00000525990 DDX46Q7L014 1031 aaKnown RBP15.58■□□□□ 0.08
SSBP3-210ENST00000525990 GRAPLQ8TC17 118 aaPredicted RBP15.58■□□□□ 0.08
SSBP3-210ENST00000525990 HACL1Q9UJ83 578 aa15.58■□□□□ 0.08
SSBP3-210ENST00000525990 IQCA1LA6NCM1 817 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms