RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
CCDC90B-204ENST00000525504 FLT4P35916 1363 aa8.21□□□□□ -1.1
CCDC90B-204ENST00000525504 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 MON2Q7Z3U7 1717 aa8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 RAPGEF4Q8WZA2 1011 aa8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 FCF1Q9Y324 198 aaKnown RBP8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 LRRC37A3O60309 1634 aa8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 RGPD1P0DJD0 1748 aa8.2□□□□□ -1.1
CCDC90B-204ENST00000525504 CYP27B1O15528 508 aa8.19□□□□□ -1.1
CCDC90B-204ENST00000525504 GSK3AP49840 483 aa8.19□□□□□ -1.1
CCDC90B-204ENST00000525504 NSD2O96028 1365 aa8.19□□□□□ -1.1
CCDC90B-204ENST00000525504 TNS1Q9HBL0 1735 aaKnown RBP8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 USHBP1Q8N6Y0 703 aa8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 MTFR1LQ9H019 292 aa8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 MEGF6O75095 1541 aa8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 LRP5O75197 1615 aa8.18□□□□□ -1.1
CCDC90B-204ENST00000525504 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 ZBTB7AO95365 584 aa8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 ZNF827Q17R98 1081 aa8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
CCDC90B-204ENST00000525504 PER1O15534 1290 aaPredicted RBP8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 SLC10A3P09131 477 aa8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 EIF4A2Q14240 407 aaKnown RBP8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 PCDH11XQ9BZA7 1347 aa8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 PCDH11YQ9BZA8 1340 aa8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 PLEKHG2Q9H7P9 1386 aa8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
CCDC90B-204ENST00000525504 ZBTB24O43167 697 aaPredicted RBP8.15□□□□□ -1.1
CCDC90B-204ENST00000525504 PIGBQ92521 554 aa8.15□□□□□ -1.1
CCDC90B-204ENST00000525504 POLR3GLQ9BT43 218 aa8.15□□□□□ -1.1
CCDC90B-204ENST00000525504 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
CCDC90B-204ENST00000525504 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.1
CCDC90B-204ENST00000525504 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 KIF7Q2M1P5 1343 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 PNPLA7Q6ZV29 1317 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 IGSF1Q8N6C5 1336 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 J3QL48 77 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 KCNQ4P56696 695 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 HPS1Q92902 700 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 SMARCC1Q92922 1105 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 SYT17Q9BSW7 474 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 CCNL1Q9UK58 526 aaPredicted RBP8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 KNSTRNQ9Y448 316 aa8.14□□□□□ -1.11
CCDC90B-204ENST00000525504 PHKG2P15735 406 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 IL13P35225 146 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 PUS10Q3MIT2 529 aaKnown RBP8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 ARXQ96QS3 562 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 TFCP2L1Q9NZI6 479 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 RREB1Q92766 1687 aa8.13□□□□□ -1.11
CCDC90B-204ENST00000525504 MAP3K5Q99683 1374 aa8.12□□□□□ -1.11
CCDC90B-204ENST00000525504 ERVV-2B6SEH9 535 aa8.12□□□□□ -1.11
CCDC90B-204ENST00000525504 PLEKHO1Q53GL0 409 aaPredicted RBP8.12□□□□□ -1.11
CCDC90B-204ENST00000525504 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
CCDC90B-204ENST00000525504 FHDC1Q9C0D6 1143 aaPredicted RBP8.12□□□□□ -1.11
CCDC90B-204ENST00000525504 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 RCCD1A6NED2 376 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 SIK1P57059 783 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 AMOTQ4VCS5 1084 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 DCAF5Q96JK2 942 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 RGPD3A6NKT7 1758 aaPredicted RBP8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 RGPD4Q7Z3J3 1758 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 NUP188Q5SRE5 1749 aa8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-204ENST00000525504 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 HSP90AB1P08238 724 aaKnown RBP8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 MTHFSP49914 203 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 E2F4Q16254 413 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 ASAP1Q9ULH1 1129 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 RGPD5Q99666 1765 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 KDRP35968 1356 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 NPC1L1Q9UHC9 1359 aa8.1□□□□□ -1.11
CCDC90B-204ENST00000525504 NHSQ6T4R5 1651 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 GDF11O95390 407 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 POLD1P28340 1107 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 VEGFBP49765 207 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 ADGRG1Q9Y653 693 aa8.09□□□□□ -1.11
CCDC90B-204ENST00000525504 PAPPAQ13219 1627 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 RASSF7Q02833 373 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 TRIM32Q13049 653 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 ITPK1Q13572 414 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms